Gene info for mRNA_4935 in Rhodosporidium toruloides IFO0880

Name: 13303
Annotation: BLAST salivary gland secretion 1 [Moniliophthora roreri...
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,356,416 to 1,359,547
See nucleotide sequence around mRNA_4935 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13298 and 13299 are separated by 333 nucleotides13299 and 13300 are separated by 499 nucleotides13300 and 13301 are separated by 338 nucleotides13301 and 13302 are separated by 207 nucleotides13302 and 13303 are separated by 544 nucleotides13303 and 13304 are separated by 166 nucleotides13304 and 13305 are separated by 364 nucleotides13305 and 13306 are separated by 695 nucleotides13306 and 13307 are separated by 151 nucleotides13307 and 13308 are separated by 701 nucleotides mRNA_4930: 13298 - HMMPfam-Ubiquitin family-PF00240,HMMPfam-BAG domain-PF02179,ProSiteProfiles-Ubiquitin domain profile.-PS50053,ProSiteProfiles-BAG domain profile.-PS51035,SMART-BAG domains, present in regulator of Hsp70 proteins-SM00264,SUPERFAMILY--SSF54236,SUPERFAMILY--SSF63491, at 1,342,722 to 1,344,500 13298 mRNA_4931: 13299 - ProSiteProfiles-BTB domain profile.-PS50097, at 1,344,834 to 1,346,285 13299 mRNA_4932: 13300 - K11547 NDC80, HEC1, TID3 kinetochore protein NDC80, at 1,346,785 to 1,349,520 13300 mRNA_4933: 13301 - K14972 PAXIP1, PTIP PAX-interacting protein 1, at 1,349,859 to 1,354,237 13301 mRNA_4934: 13302 - K00611 OTC, argF, argI ornithine carbamoyltransferase, at 1,354,445 to 1,355,871 13302 mRNA_4935: 13303 - BLAST salivary gland secretion 1 [Moniliophthora roreri..., at 1,356,416 to 1,359,547 13303 mRNA_4936: 13304 - HMMPfam-MFS_1 like family-PF12832, at 1,359,714 to 1,362,398 13304 mRNA_4937: 13305 - HMMPfam-Single-strand binding protein family-PF00436,ProSiteProfiles-Single-strand binding (SSB) domain profile.-PS50935,SUPERFAMILY--SSF50249, at 1,362,763 to 1,363,546 13305 mRNA_4938: 13306 - HMMPfam-Protein of unknown function (DUF1749)-PF08538,SUPERFAMILY--SSF53474, at 1,364,242 to 1,365,196 13306 mRNA_4939: 13307 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1,365,348 to 1,366,647 13307 mRNA_4940: 13308 - K06693 PSMD9 26S proteasome non-ATPase regulatory subunit 9, at 1,367,349 to 1,367,987 13308
Locus Name Description Strand Phenotype
mRNA_4930 13298 HMMPfam-Ubiquitin family-PF00240,HMMPfam-BAG domain-PF02179,ProSiteProfiles-Ubiquitin domain profile.-PS50053,ProSiteProfiles-BAG domain profile.-PS51035,SMART-BAG domains, present in regulator of Hsp70 proteins-SM00264,SUPERFAMILY--SSF54236,SUPERFAMILY--SSF63491 + cofit
mRNA_4931 13299 ProSiteProfiles-BTB domain profile.-PS50097 - cofit
mRNA_4932 13300 K11547 NDC80, HEC1, TID3 kinetochore protein NDC80 - no data
mRNA_4933 13301 K14972 PAXIP1, PTIP PAX-interacting protein 1 + cofit
mRNA_4934 13302 K00611 OTC, argF, argI ornithine carbamoyltransferase + strong
mRNA_4935 13303 BLAST salivary gland secretion 1 [Moniliophthora roreri... + cofit
mRNA_4936 13304 HMMPfam-MFS_1 like family-PF12832 - insig.
mRNA_4937 13305 HMMPfam-Single-strand binding protein family-PF00436,ProSiteProfiles-Single-strand binding (SSB) domain profile.-PS50935,SUPERFAMILY--SSF50249 - no data
mRNA_4938 13306 HMMPfam-Protein of unknown function (DUF1749)-PF08538,SUPERFAMILY--SSF53474 - cofit
mRNA_4939 13307 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 - cofit
mRNA_4940 13308 K06693 PSMD9 26S proteasome non-ATPase regulatory subunit 9 - cofit

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