Gene info for mRNA_5019 in Rhodosporidium toruloides IFO0880

Name: 13387
Annotation: HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,560,613 to 1,563,320
See nucleotide sequence around mRNA_5019 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13382 and 13383 are separated by 480 nucleotides13383 and 13384 are separated by 718 nucleotides13384 and 13385 are separated by 271 nucleotides13385 and 13386 are separated by 157 nucleotides13386 and 13387 are separated by 70 nucleotides13387 and 13388 are separated by 326 nucleotides13388 and 13389 are separated by 190 nucleotides13389 and 13390 are separated by 241 nucleotides13390 and 13391 are separated by 240 nucleotides13391 and 13392 are separated by 491 nucleotides mRNA_5014: 13382 - K01621 xfp, xpk xylulose-5-phosphate/fructose-6-phosphate phosphoketolase, at 1,549,250 to 1,553,078 13382 mRNA_5015: 13383 - K00925 ackA acetate kinase, at 1,553,559 to 1,555,008 13383 mRNA_5016: 13384 - BLAST UPF0643 protein PB2B2.08 [Hypsizygus marmoreus], at 1,555,727 to 1,556,735 13384 mRNA_5017: 13385 - K08963 mtnA methylthioribose-1-phosphate isomerase, at 1,557,007 to 1,558,590 13385 mRNA_5018: 13386 - Hypothetical Protein, at 1,558,748 to 1,560,542 13386 mRNA_5019: 13387 - HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959, at 1,560,613 to 1,563,320 13387 mRNA_5020: 13388 - K20178 VPS8 vacuolar protein sorting-associated protein 8, at 1,563,647 to 1,569,301 13388 mRNA_5021: 13389 - K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7, at 1,569,492 to 1,571,260 13389 mRNA_5022: 13390 - Hypothetical Protein, at 1,571,502 to 1,572,574 13390 mRNA_5023: 13391 - K17866 DPH2 diphthamide biosynthesis protein 2, at 1,572,815 to 1,575,164 13391 mRNA_5024: 13392 - K11124 SMG6, EST1A protein SMG6, at 1,575,656 to 1,580,280 13392
Locus Name Description Strand Phenotype
mRNA_5014 13382 K01621 xfp, xpk xylulose-5-phosphate/fructose-6-phosphate phosphoketolase - cofit
mRNA_5015 13383 K00925 ackA acetate kinase - cofit
mRNA_5016 13384 BLAST UPF0643 protein PB2B2.08 [Hypsizygus marmoreus] + cofit
mRNA_5017 13385 K08963 mtnA methylthioribose-1-phosphate isomerase + cofit
mRNA_5018 13386 Hypothetical Protein - cofit
mRNA_5019 13387 HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 + cofit
mRNA_5020 13388 K20178 VPS8 vacuolar protein sorting-associated protein 8 + cofit
mRNA_5021 13389 K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7 + cofit
mRNA_5022 13390 Hypothetical Protein + cofit
mRNA_5023 13391 K17866 DPH2 diphthamide biosynthesis protein 2 - cofit
mRNA_5024 13392 K11124 SMG6, EST1A protein SMG6 + cofit

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