Gene info for mRNA_5031 in Rhodosporidium toruloides IFO0880

Name: 13399
Annotation: HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,595,047 to 1,597,304
See nucleotide sequence around mRNA_5031 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13394 and 13395 are separated by 544 nucleotides13395 and 13396 are separated by 1103 nucleotides13396 and 13397 are separated by 683 nucleotides13397 and 13398 are separated by 103 nucleotides13398 and 13399 are separated by 530 nucleotides13399 and 13400 are separated by 502 nucleotides13400 and 13401 are separated by 893 nucleotides13401 and 13402 are separated by 957 nucleotides13402 and 13403 are separated by 522 nucleotides13403 and 13404 are separated by 206 nucleotides mRNA_5026: 13394 - K01698 hemB, ALAD porphobilinogen synthase, at 1,583,295 to 1,584,679 13394 mRNA_5027: 13395 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1,585,224 to 1,587,309 13395 mRNA_5028: 13396 - HMMPfam-Cryptococcal mannosyltransferase 1-PF11735, at 1,588,413 to 1,590,373 13396 mRNA_5029: 13397 - HMMPfam-Ornithine decarboxylase antizyme-PF02100,SUPERFAMILY--SSF55729, at 1,591,057 to 1,592,630 13397 mRNA_5030: 13398 - K01889 FARSA, pheS phenylalanyl-tRNA synthetase alpha chain, at 1,592,734 to 1,594,516 13398 mRNA_5031: 13399 - HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785, at 1,595,047 to 1,597,304 13399 mRNA_5032: 13400 - Hypothetical Protein, at 1,597,807 to 1,600,574 13400 mRNA_5033: 13401 - KOG4436 Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains), at 1,601,468 to 1,605,781 13401 mRNA_5034: 13402 - KOG4589 Cell division protein FtsJ, at 1,606,739 to 1,607,440 13402 mRNA_5035: 13403 - K11304 TIP60, KAT5, ESA1 histone acetyltransferase HTATIP, at 1,607,963 to 1,609,879 13403 mRNA_5036: 13404 - Hypothetical Protein, at 1,610,086 to 1,610,551 13404
Locus Name Description Strand Phenotype
mRNA_5026 13394 K01698 hemB, ALAD porphobilinogen synthase + no data
mRNA_5027 13395 HMMPfam-Cryptococcal mannosyltransferase 1-PF11735 + cofit
mRNA_5028 13396 HMMPfam-Cryptococcal mannosyltransferase 1-PF11735 + cofit
mRNA_5029 13397 HMMPfam-Ornithine decarboxylase antizyme-PF02100,SUPERFAMILY--SSF55729 - cofit
mRNA_5030 13398 K01889 FARSA, pheS phenylalanyl-tRNA synthetase alpha chain + no data
mRNA_5031 13399 HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785 + strong
mRNA_5032 13400 Hypothetical Protein + cofit
mRNA_5033 13401 KOG4436 Predicted GTPase activator NB4S/EVI5 (contains TBC domain)/Calmodulin-binding protein Pollux (contains PTB and TBC domains) + cofit
mRNA_5034 13402 KOG4589 Cell division protein FtsJ - cofit
mRNA_5035 13403 K11304 TIP60, KAT5, ESA1 histone acetyltransferase HTATIP + no data
mRNA_5036 13404 Hypothetical Protein - cofit

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