Gene info for mRNA_5057 in Rhodosporidium toruloides IFO0880

Name: 13425
Annotation: K03252 EIF3C translation initiation factor 3 subunit C
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,647,426 to 1,650,006
See nucleotide sequence around mRNA_5057 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13420 and 13421 are separated by 349 nucleotides13421 and 13422 are separated by 575 nucleotides13422 and 13423 are separated by 559 nucleotides13423 and 13424 are separated by 817 nucleotides13424 and 13425 are separated by 782 nucleotides13425 and 13426 are separated by 218 nucleotides13426 and 13427 are separated by 199 nucleotides13427 and 13428 are separated by 245 nucleotides13428 and 13429 are separated by 192 nucleotides13429 and 13430 are separated by 68 nucleotides mRNA_5052: 13420 - Hypothetical Protein, at 1,638,051 to 1,638,624 13420 mRNA_5053: 13421 - Hypothetical Protein, at 1,638,974 to 1,640,272 13421 mRNA_5054: 13422 - Hypothetical Protein, at 1,640,848 to 1,641,700 13422 mRNA_5055: 13423 - KOG1289 Amino acid transporters, at 1,642,260 to 1,644,737 13423 mRNA_5056: 13424 - K02137 ATPeF0O, ATP5O, ATP5 F-type H+-transporting ATPase subunit O, at 1,645,555 to 1,646,643 13424 mRNA_5057: 13425 - K03252 EIF3C translation initiation factor 3 subunit C, at 1,647,426 to 1,650,006 13425 mRNA_5058: 13426 - K07249 E1.2.1.36 retinal dehydrogenase, at 1,650,225 to 1,652,548 13426 mRNA_5059: 13427 - KOG0022 Alcohol dehydrogenase, class III, at 1,652,748 to 1,654,435 13427 mRNA_5060: 13428 - HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756, at 1,654,681 to 1,660,965 13428 mRNA_5061: 13429 - K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4, at 1,661,158 to 1,662,498 13429 mRNA_5062: 13430 - HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359, at 1,662,567 to 1,663,555 13430
Locus Name Description Strand Phenotype
mRNA_5052 13420 Hypothetical Protein + cofit
mRNA_5053 13421 Hypothetical Protein + cofit
mRNA_5054 13422 Hypothetical Protein + cofit
mRNA_5055 13423 KOG1289 Amino acid transporters - cofit
mRNA_5056 13424 K02137 ATPeF0O, ATP5O, ATP5 F-type H+-transporting ATPase subunit O - no data
mRNA_5057 13425 K03252 EIF3C translation initiation factor 3 subunit C + no data
mRNA_5058 13426 K07249 E1.2.1.36 retinal dehydrogenase - strong
mRNA_5059 13427 KOG0022 Alcohol dehydrogenase, class III - cofit
mRNA_5060 13428 HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756 + cofit
mRNA_5061 13429 K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4 - cofit
mRNA_5062 13430 HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359 + cofit

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