Gene info for mRNA_5062 in Rhodosporidium toruloides IFO0880

Name: 13430
Annotation: HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,662,567 to 1,663,555
See nucleotide sequence around mRNA_5062 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13425 and 13426 are separated by 218 nucleotides13426 and 13427 are separated by 199 nucleotides13427 and 13428 are separated by 245 nucleotides13428 and 13429 are separated by 192 nucleotides13429 and 13430 are separated by 68 nucleotides13430 and 13431 are separated by 308 nucleotides13431 and 13432 are separated by 247 nucleotides13432 and 13433 are separated by 214 nucleotides13433 and 13434 are separated by 171 nucleotides13434 and 13435 are separated by 750 nucleotides mRNA_5057: 13425 - K03252 EIF3C translation initiation factor 3 subunit C, at 1,647,426 to 1,650,006 13425 mRNA_5058: 13426 - K07249 E1.2.1.36 retinal dehydrogenase, at 1,650,225 to 1,652,548 13426 mRNA_5059: 13427 - KOG0022 Alcohol dehydrogenase, class III, at 1,652,748 to 1,654,435 13427 mRNA_5060: 13428 - HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756, at 1,654,681 to 1,660,965 13428 mRNA_5061: 13429 - K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4, at 1,661,158 to 1,662,498 13429 mRNA_5062: 13430 - HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359, at 1,662,567 to 1,663,555 13430 mRNA_5063: 13431 - K10301 FBXO21 F-box protein 21, at 1,663,864 to 1,665,707 13431 mRNA_5064: 13432 - K00286 proC pyrroline-5-carboxylate reductase, at 1,665,955 to 1,667,428 13432 mRNA_5065: 13433 - HMMPfam-Mitotic checkpoint regulator, MAD2B-interacting-PF10253, at 1,667,643 to 1,669,072 13433 mRNA_5066: 13434 - KOG3170 Conserved phosducin-like protein, at 1,669,244 to 1,670,342 13434 mRNA_5067: 13435 - Hypothetical Protein, at 1,671,093 to 1,672,541 13435
Locus Name Description Strand Phenotype
mRNA_5057 13425 K03252 EIF3C translation initiation factor 3 subunit C + no data
mRNA_5058 13426 K07249 E1.2.1.36 retinal dehydrogenase - strong
mRNA_5059 13427 KOG0022 Alcohol dehydrogenase, class III - cofit
mRNA_5060 13428 HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756 + cofit
mRNA_5061 13429 K11414 SIRT4, SIR2L4 NAD-dependent deacetylase sirtuin 4 - cofit
mRNA_5062 13430 HMMPfam-Zinc-binding-PF12907,SUPERFAMILY--SSF118359 + cofit
mRNA_5063 13431 K10301 FBXO21 F-box protein 21 + cofit
mRNA_5064 13432 K00286 proC pyrroline-5-carboxylate reductase - no data
mRNA_5065 13433 HMMPfam-Mitotic checkpoint regulator, MAD2B-interacting-PF10253 + cofit
mRNA_5066 13434 KOG3170 Conserved phosducin-like protein - cofit
mRNA_5067 13435 Hypothetical Protein - cofit

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