Gene info for mRNA_5107 in Rhodosporidium toruloides IFO0880

Name: 13475
Annotation: K03130 TAF5 transcription initiation factor TFIID subunit 5
Type 1: Protein-coding gene
Located on scaffold scaffold_3, + strand, nucleotides 1,772,311 to 1,779,712
See nucleotide sequence around mRNA_5107 or for all of scaffold scaffold_3

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13470 and 13471 are separated by 789 nucleotides13471 and 13472 are separated by 729 nucleotides13472 and 13473 are separated by 724 nucleotides13473 and 13474 are separated by 627 nucleotides13474 and 13475 are separated by 176 nucleotides13475 and 13476 are separated by 147 nucleotides13476 and 13477 are separated by 383 nucleotides13477 and 13478 are separated by 262 nucleotides13478 and 13479 are separated by 263 nucleotides13479 and 13480 are separated by 765 nucleotides mRNA_5102: 13470 - KOG0619 FOG Leucine rich repeat, at 1,753,629 to 1,757,881 13470 mRNA_5103: 13471 - K03099 SOS son of sevenless, at 1,758,671 to 1,763,554 13471 mRNA_5104: 13472 - Hypothetical Protein, at 1,764,284 to 1,764,496 13472 mRNA_5105: 13473 - HMMPfam-Frequency clock protein-PF09421, at 1,765,221 to 1,768,687 13473 mRNA_5106: 13474 - K12819 SLU7 pre-mRNA-processing factor SLU7, at 1,769,315 to 1,772,134 13474 mRNA_5107: 13475 - K03130 TAF5 transcription initiation factor TFIID subunit 5, at 1,772,311 to 1,779,712 13475 mRNA_5108: 13476 - BLAST V175_0103_1006-like protein [Amanita sp. 'sp-jack1'], at 1,779,860 to 1,781,501 13476 mRNA_5109: 13477 - K17605 PPP2R4, PTPA serine/threonine-protein phosphatase 2A activator, at 1,781,885 to 1,783,353 13477 mRNA_5110: 13478 - HMMPfam-Phosphotyrosyl phosphate activator (PTPA) protein-PF03095,SUPERFAMILY--SSF140984, at 1,783,616 to 1,785,108 13478 mRNA_5111: 13479 - K19881 BUD7, BCH1 Chs5-Arf1p-binding protein BUD7/BCH1, at 1,785,372 to 1,788,381 13479 mRNA_5112: 13480 - KOG0872 Sterol C5 desaturase, at 1,789,147 to 1,790,624 13480
Locus Name Description Strand Phenotype
mRNA_5102 13470 KOG0619 FOG Leucine rich repeat + cofit
mRNA_5103 13471 K03099 SOS son of sevenless + cofit
mRNA_5104 13472 Hypothetical Protein - no data
mRNA_5105 13473 HMMPfam-Frequency clock protein-PF09421 - cofit
mRNA_5106 13474 K12819 SLU7 pre-mRNA-processing factor SLU7 - insig.
mRNA_5107 13475 K03130 TAF5 transcription initiation factor TFIID subunit 5 + cofit
mRNA_5108 13476 BLAST V175_0103_1006-like protein [Amanita sp. 'sp-jack1'] - cofit
mRNA_5109 13477 K17605 PPP2R4, PTPA serine/threonine-protein phosphatase 2A activator - no data
mRNA_5110 13478 HMMPfam-Phosphotyrosyl phosphate activator (PTPA) protein-PF03095,SUPERFAMILY--SSF140984 - cofit
mRNA_5111 13479 K19881 BUD7, BCH1 Chs5-Arf1p-binding protein BUD7/BCH1 - cofit
mRNA_5112 13480 KOG0872 Sterol C5 desaturase + cofit

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