Gene info for mRNA_5156 in Rhodosporidium toruloides IFO0880

Name: 13524
Annotation: K00108 betA, CHDH choline dehydrogenase
Type 1: Protein-coding gene
Located on scaffold scaffold_4, + strand, nucleotides 32,964 to 35,897
See nucleotide sequence around mRNA_5156 or for all of scaffold scaffold_4

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13519 and 13520 are separated by 575 nucleotides13520 and 13521 are separated by 225 nucleotides13521 and 13522 are separated by 747 nucleotides13522 and 13523 are separated by 461 nucleotides13523 and 13524 are separated by 812 nucleotides13524 and 13525 are separated by 420 nucleotides13525 and 13526 are separated by 965 nucleotides13526 and 13527 are separated by 822 nucleotides13527 and 13528 are separated by 545 nucleotides13528 and 13529 are separated by 1069 nucleotides mRNA_5151: 13519 - HMMPfam-SUR7/PalI family-PF06687, at 22,943 to 24,220 13519 mRNA_5152: 13520 - HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281, at 24,796 to 26,164 13520 mRNA_5153: 13521 - HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474, at 26,390 to 28,027 13521 mRNA_5154: 13522 - HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281, at 28,775 to 30,256 13522 mRNA_5155: 13523 - BLAST unknown [Tremella fuciformis], at 30,718 to 32,151 13523 mRNA_5156: 13524 - K00108 betA, CHDH choline dehydrogenase, at 32,964 to 35,897 13524 mRNA_5157: 13525 - K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216, at 36,318 to 38,711 13525 mRNA_5158: 13526 - K15128 MED6 mediator of RNA polymerase II transcription subunit 6, at 39,677 to 40,567 13526 mRNA_5159: 13527 - Hypothetical Protein, at 41,390 to 42,543 13527 mRNA_5160: 13528 - Hypothetical Protein, at 43,089 to 43,847 13528 mRNA_5161: 13529 - Hypothetical Protein, at 44,917 to 45,595 13529
Locus Name Description Strand Phenotype
mRNA_5151 13519 HMMPfam-SUR7/PalI family-PF06687 - cofit
mRNA_5152 13520 HMMPfam-Domain of unknown function (DUF4336)-PF14234,SUPERFAMILY--SSF56281 - insig.
mRNA_5153 13521 HMMPfam-Secretory lipase-PF03583,PIRSF--PIRSF029171,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF53474 - cofit
mRNA_5154 13522 HMMPfam-Beta-lactamase superfamily domain-PF12706,SUPERFAMILY--SSF56281 + insig.
mRNA_5155 13523 BLAST unknown [Tremella fuciformis] - cofit
mRNA_5156 13524 K00108 betA, CHDH choline dehydrogenase + insig.
mRNA_5157 13525 K11976 RNF216 TRIAD3 E3 ubiquitin-protein ligase RNF216 - cofit
mRNA_5158 13526 K15128 MED6 mediator of RNA polymerase II transcription subunit 6 - no data
mRNA_5159 13527 Hypothetical Protein + cofit
mRNA_5160 13528 Hypothetical Protein + cofit
mRNA_5161 13529 Hypothetical Protein + cofit

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