Gene info for mRNA_5232 in Rhodosporidium toruloides IFO0880

Name: 13600
Annotation: SUPERFAMILY--SSF52047
Type 1: Protein-coding gene
Located on scaffold scaffold_4, + strand, nucleotides 218,691 to 220,745
See nucleotide sequence around mRNA_5232 or for all of scaffold scaffold_4

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13595 and 13596 are separated by 370 nucleotides13596 and 13597 are separated by 117 nucleotides13597 and 13598 are separated by 1412 nucleotides13598 and 13599 are separated by 506 nucleotides13599 and 13600 are separated by 512 nucleotides13600 and 13601 are separated by 968 nucleotides13601 and 13602 are separated by 758 nucleotides13602 and 13603 are separated by 514 nucleotides13603 and 13604 are separated by 203 nucleotides13604 and 13605 are separated by 311 nucleotides mRNA_5227: 13595 - K00601 E2.1.2.2 phosphoribosylglycinamide formyltransferase, at 201,689 to 202,738 13595 mRNA_5228: 13596 - HMMPfam-Mis6-PF07778, at 203,109 to 206,278 13596 mRNA_5229: 13597 - SUPERFAMILY--SSF51445, at 206,396 to 208,003 13597 mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209,416 to 215,994 13598 mRNA_5231: 13599 - Hypothetical Protein, at 216,501 to 218,178 13599 mRNA_5232: 13600 - SUPERFAMILY--SSF52047, at 218,691 to 220,745 13600 mRNA_5233: 13601 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 221,714 to 224,141 13601 mRNA_5234: 13602 - KOG0725 Reductases with broad range of substrate specificities, at 224,900 to 226,337 13602 mRNA_5235: 13603 - KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes, at 226,852 to 231,804 13603 mRNA_5236: 13604 - KOG2031 Tyrosyl-DNA phosphodiesterase, at 232,008 to 233,871 13604 mRNA_5237: 13605 - K02914 RP-L34, MRPL34, rpmH large subunit ribosomal protein L34, at 234,183 to 234,602 13605
Locus Name Description Strand Phenotype
mRNA_5227 13595 K00601 E2.1.2.2 phosphoribosylglycinamide formyltransferase + no data
mRNA_5228 13596 HMMPfam-Mis6-PF07778 + cofit
mRNA_5229 13597 SUPERFAMILY--SSF51445 - cofit
mRNA_5230 13598 K17906 ATG2 autophagy-related protein 2 - strong
mRNA_5231 13599 Hypothetical Protein - cofit
mRNA_5232 13600 SUPERFAMILY--SSF52047 + cofit
mRNA_5233 13601 HMMPfam-Transmembrane amino acid transporter protein-PF01490 + cofit
mRNA_5234 13602 KOG0725 Reductases with broad range of substrate specificities - cofit
mRNA_5235 13603 KOG1178 Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes + insig.
mRNA_5236 13604 KOG2031 Tyrosyl-DNA phosphodiesterase + insig.
mRNA_5237 13605 K02914 RP-L34, MRPL34, rpmH large subunit ribosomal protein L34 + no data

Or browse nearby genes

Or see the comparative fitness browser