Gene info for mRNA_5279 in Rhodosporidium toruloides IFO0880

Name: 13647
Annotation: KOG2231 Predicted E3 ubiquitin ligase
Type 1: Protein-coding gene
Located on scaffold scaffold_4, - strand, nucleotides 344,945 to 347,664
See nucleotide sequence around mRNA_5279 or for all of scaffold scaffold_4

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13642 and 13643 are separated by 334 nucleotides13643 and 13644 are separated by 920 nucleotides13644 and 13645 are separated by 156 nucleotides13645 and 13646 are separated by 274 nucleotides13646 and 13647 are separated by 411 nucleotides13647 and 13648 are separated by 886 nucleotides13648 and 13649 are separated by 771 nucleotides13649 and 13650 are separated by 289 nucleotides13650 and 13651 are separated by 152 nucleotides13651 and 13652 are separated by 1477 nucleotides mRNA_5274: 13642 - KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily, at 334,553 to 337,184 13642 mRNA_5275: 13643 - K06688 UBE2C, UBC11 ubiquitin-conjugating enzyme E2 C, at 337,519 to 338,338 13643 mRNA_5276: 13644 - Hypothetical Protein, at 339,259 to 340,241 13644 mRNA_5277: 13645 - Hypothetical Protein, at 340,398 to 341,217 13645 mRNA_5278: 13646 - KOG1488 Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily), at 341,492 to 344,533 13646 mRNA_5279: 13647 - KOG2231 Predicted E3 ubiquitin ligase, at 344,945 to 347,664 13647 mRNA_5280: 13648 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 348,551 to 349,893 13648 mRNA_5281: 13649 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 350,665 to 352,490 13649 mRNA_5282: 13650 - Hypothetical Protein, at 352,780 to 353,603 13650 mRNA_5283: 13651 - Hypothetical Protein, at 353,756 to 354,946 13651 mRNA_5284: 13652 - Hypothetical Protein, at 356,424 to 357,463 13652
Locus Name Description Strand Phenotype
mRNA_5274 13642 KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily - cofit
mRNA_5275 13643 K06688 UBE2C, UBC11 ubiquitin-conjugating enzyme E2 C - cofit
mRNA_5276 13644 Hypothetical Protein + cofit
mRNA_5277 13645 Hypothetical Protein - cofit
mRNA_5278 13646 KOG1488 Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) - cofit
mRNA_5279 13647 KOG2231 Predicted E3 ubiquitin ligase - cofit
mRNA_5280 13648 KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily + cofit
mRNA_5281 13649 KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily + cofit
mRNA_5282 13650 Hypothetical Protein + no data
mRNA_5283 13651 Hypothetical Protein - cofit
mRNA_5284 13652 Hypothetical Protein - cofit

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