Gene info for mRNA_5317 in Rhodosporidium toruloides IFO0880

Name: 13685
Annotation: K17498 SPN1, IWS1 transcription factor SPN1
Type 1: Protein-coding gene
Located on scaffold scaffold_4, - strand, nucleotides 441,871 to 444,778
See nucleotide sequence around mRNA_5317 or for all of scaffold scaffold_4

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13680 and 13681 are separated by 450 nucleotides13681 and 13682 are separated by 576 nucleotides13682 and 13683 are separated by 833 nucleotides13683 and 13684 are separated by 489 nucleotides13684 and 13685 are separated by 242 nucleotides13685 and 13686 are separated by 82 nucleotides13686 and 13687 are separated by 712 nucleotides13687 and 13688 are separated by 345 nucleotides13688 and 13689 are separated by 423 nucleotides13689 and 13690 are separated by 146 nucleotides mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429,063 to 429,953 13680 mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430,404 to 433,324 13681 mRNA_5314: 13682 - Hypothetical Protein, at 433,901 to 435,484 13682 mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436,318 to 439,528 13683 mRNA_5316: 13684 - Hypothetical Protein, at 440,018 to 441,628 13684 mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441,871 to 444,778 13685 mRNA_5318: 13686 - KOG4315 G-patch nucleic acid binding protein, at 444,861 to 446,150 13686 mRNA_5319: 13687 - HMMPfam-Plasma-membrane choline transporter-PF04515, at 446,863 to 449,105 13687 mRNA_5320: 13688 - K03038 PSMD7, RPN8 26S proteasome regulatory subunit N8, at 449,451 to 450,740 13688 mRNA_5321: 13689 - K11108 RCL1 RNA 3'-terminal phosphate cyclase-like protein, at 451,164 to 452,723 13689 mRNA_5322: 13690 - K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase, at 452,870 to 455,692 13690
Locus Name Description Strand Phenotype
mRNA_5312 13680 K18182 COX16 cytochrome c oxidase assembly protein subunit 16 - no data
mRNA_5313 13681 KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15 + cofit
mRNA_5314 13682 Hypothetical Protein + cofit
mRNA_5315 13683 K06158 ABCF3 ATP-binding cassette, subfamily F, member 3 - cofit
mRNA_5316 13684 Hypothetical Protein + cofit
mRNA_5317 13685 K17498 SPN1, IWS1 transcription factor SPN1 - insig.
mRNA_5318 13686 KOG4315 G-patch nucleic acid binding protein + no data
mRNA_5319 13687 HMMPfam-Plasma-membrane choline transporter-PF04515 - cofit
mRNA_5320 13688 K03038 PSMD7, RPN8 26S proteasome regulatory subunit N8 - no data
mRNA_5321 13689 K11108 RCL1 RNA 3'-terminal phosphate cyclase-like protein + no data
mRNA_5322 13690 K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase - cofit

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