Gene info for mRNA_5320 in Rhodosporidium toruloides IFO0880

Name: 13688
Annotation: K03038 PSMD7, RPN8 26S proteasome regulatory subunit N8
Type 1: Protein-coding gene
Located on scaffold scaffold_4, - strand, nucleotides 449,451 to 450,740
See nucleotide sequence around mRNA_5320 or for all of scaffold scaffold_4

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13683 and 13684 are separated by 489 nucleotides13684 and 13685 are separated by 242 nucleotides13685 and 13686 are separated by 82 nucleotides13686 and 13687 are separated by 712 nucleotides13687 and 13688 are separated by 345 nucleotides13688 and 13689 are separated by 423 nucleotides13689 and 13690 are separated by 146 nucleotides13690 and 13691 are separated by 373 nucleotides13691 and 13692 are separated by 140 nucleotides13692 and 13693 are separated by 483 nucleotides mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436,318 to 439,528 13683 mRNA_5316: 13684 - Hypothetical Protein, at 440,018 to 441,628 13684 mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441,871 to 444,778 13685 mRNA_5318: 13686 - KOG4315 G-patch nucleic acid binding protein, at 444,861 to 446,150 13686 mRNA_5319: 13687 - HMMPfam-Plasma-membrane choline transporter-PF04515, at 446,863 to 449,105 13687 mRNA_5320: 13688 - K03038 PSMD7, RPN8 26S proteasome regulatory subunit N8, at 449,451 to 450,740 13688 mRNA_5321: 13689 - K11108 RCL1 RNA 3'-terminal phosphate cyclase-like protein, at 451,164 to 452,723 13689 mRNA_5322: 13690 - K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase, at 452,870 to 455,692 13690 mRNA_5323: 13691 - K10842 MNAT1 CDK-activating kinase assembly factor MAT1, at 456,066 to 457,717 13691 mRNA_5324: 13692 - KOG2852 Possible oxidoreductase, at 457,858 to 459,287 13692 mRNA_5325: 13693 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266, at 459,771 to 461,459 13693
Locus Name Description Strand Phenotype
mRNA_5315 13683 K06158 ABCF3 ATP-binding cassette, subfamily F, member 3 - cofit
mRNA_5316 13684 Hypothetical Protein + cofit
mRNA_5317 13685 K17498 SPN1, IWS1 transcription factor SPN1 - insig.
mRNA_5318 13686 KOG4315 G-patch nucleic acid binding protein + no data
mRNA_5319 13687 HMMPfam-Plasma-membrane choline transporter-PF04515 - cofit
mRNA_5320 13688 K03038 PSMD7, RPN8 26S proteasome regulatory subunit N8 - no data
mRNA_5321 13689 K11108 RCL1 RNA 3'-terminal phosphate cyclase-like protein + no data
mRNA_5322 13690 K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase - cofit
mRNA_5323 13691 K10842 MNAT1 CDK-activating kinase assembly factor MAT1 - no data
mRNA_5324 13692 KOG2852 Possible oxidoreductase + cofit
mRNA_5325 13693 HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266 + cofit

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