Gene info for mRNA_5412 in Rhodosporidium toruloides IFO0880

Name: 13780
Annotation: ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 41,309 to 43,272
See nucleotide sequence around mRNA_5412 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13775 and 13776 are separated by 275 nucleotides13776 and 13777 are separated by 1240 nucleotides13777 and 13778 are separated by 993 nucleotides13778 and 13779 are separated by 545 nucleotides13779 and 13780 are separated by 175 nucleotides13780 and 13781 are separated by 550 nucleotides13781 and 13782 are separated by 122 nucleotides13782 and 13783 are separated by 1067 nucleotides13783 and 13784 are separated by 1849 nucleotides13784 and 13785 are separated by 145 nucleotides mRNA_5407: 13775 - K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+), at 28,474 to 30,165 13775 mRNA_5408: 13776 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 30,441 to 31,506 13776 mRNA_5409: 13777 - Hypothetical Protein, at 32,747 to 36,067 13777 mRNA_5410: 13778 - KOG2952 Cell cycle control protein, at 37,061 to 38,634 13778 mRNA_5411: 13779 - K03251 EIF3D translation initiation factor 3 subunit D, at 39,180 to 41,133 13779 mRNA_5412: 13780 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 41,309 to 43,272 13780 mRNA_5413: 13781 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 43,823 to 46,039 13781 mRNA_5414: 13782 - HMMPfam-Glycosyl transferase family 2-PF13704, at 46,162 to 47,875 13782 mRNA_5415: 13783 - HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024, at 48,943 to 50,652 13783 mRNA_5416: 13784 - K04496 CTBP C-terminal binding protein, at 52,502 to 53,852 13784 mRNA_5417: 13785 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 53,998 to 56,725 13785
Locus Name Description Strand Phenotype
mRNA_5407 13775 K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+) - no data
mRNA_5408 13776 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 - cofit
mRNA_5409 13777 Hypothetical Protein - cofit
mRNA_5410 13778 KOG2952 Cell cycle control protein + no data
mRNA_5411 13779 K03251 EIF3D translation initiation factor 3 subunit D + no data
mRNA_5412 13780 ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 - cofit
mRNA_5413 13781 ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 - cofit
mRNA_5414 13782 HMMPfam-Glycosyl transferase family 2-PF13704 + cofit
mRNA_5415 13783 HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024 + insig.
mRNA_5416 13784 K04496 CTBP C-terminal binding protein + cofit
mRNA_5417 13785 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - cofit

Or browse nearby genes

Or see the comparative fitness browser