Gene info for mRNA_5442 in Rhodosporidium toruloides IFO0880

Name: 13810
Annotation: HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 103,873 to 106,982
See nucleotide sequence around mRNA_5442 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13805 and 13806 are separated by 344 nucleotides13806 and 13807 are separated by 428 nucleotides13807 and 13808 are separated by 672 nucleotides13808 and 13809 are separated by 208 nucleotides13809 and 13810 are separated by 847 nucleotides13810 and 13811 are separated by 144 nucleotides13811 and 13812 are separated by 188 nucleotides13812 and 13813 are separated by 1088 nucleotides13813 and 13814 are separated by 649 nucleotides13814 and 13815 are separated by 30 nucleotides mRNA_5437: 13805 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 95,349 to 95,702 13805 mRNA_5438: 13806 - K06867 K06867 uncharacterized protein, at 96,047 to 99,541 13806 mRNA_5439: 13807 - Hypothetical Protein, at 99,970 to 100,789 13807 mRNA_5440: 13808 - Hypothetical Protein, at 101,462 to 101,965 13808 mRNA_5441: 13809 - Hypothetical Protein, at 102,174 to 103,025 13809 mRNA_5442: 13810 - HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708, at 103,873 to 106,982 13810 mRNA_5443: 13811 - KOG3085 Predicted hydrolase (HAD superfamily), at 107,127 to 108,436 13811 mRNA_5444: 13812 - HMMPfam-Eukaryotic cytochrome b561-PF03188,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 108,625 to 109,612 13812 mRNA_5445: 13813 - K07513 ACAA1 acetyl-CoA acyltransferase 1, at 110,701 to 112,520 13813 mRNA_5446: 13814 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 113,170 to 113,689 13814 mRNA_5447: 13815 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 113,720 to 116,134 13815
Locus Name Description Strand Phenotype
mRNA_5437 13805 BLAST putative protein [Melanopsichium pennsylvanicum 4] + no data
mRNA_5438 13806 K06867 K06867 uncharacterized protein + cofit
mRNA_5439 13807 Hypothetical Protein - no data
mRNA_5440 13808 Hypothetical Protein + no data
mRNA_5441 13809 Hypothetical Protein - cofit
mRNA_5442 13810 HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708 + cofit
mRNA_5443 13811 KOG3085 Predicted hydrolase (HAD superfamily) + insig.
mRNA_5444 13812 HMMPfam-Eukaryotic cytochrome b561-PF03188,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665 - cofit
mRNA_5445 13813 K07513 ACAA1 acetyl-CoA acyltransferase 1 + strong
mRNA_5446 13814 HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909 + no data
mRNA_5447 13815 HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 - cofit

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