Gene info for mRNA_5454 in Rhodosporidium toruloides IFO0880

Name: 13822
Annotation: KOG2673 Uncharacterized conserved protein, contains PSP domain
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 127,145 to 127,753
See nucleotide sequence around mRNA_5454 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13817 and 13818 are separated by 314 nucleotides13818 and 13819 are separated by 1187 nucleotides13819 and 13820 are separated by 486 nucleotides13820 and 13821 are separated by 787 nucleotides13821 and 13822 are separated by 166 nucleotides13822 and 13823 are separated by 63 nucleotides13823 and 13824 are separated by 978 nucleotides13824 and 13825 are separated by 2095 nucleotides13825 and 13826 are separated by 753 nucleotides13826 and 13827 are separated by 245 nucleotides mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117,409 to 118,509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118,824 to 121,253 13818 mRNA_5451: 13819 - Hypothetical Protein, at 122,441 to 123,785 13819 mRNA_5452: 13820 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 124,272 to 125,754 13820 mRNA_5453: 13821 - HMMPfam-Glutaredoxin-like domain (DUF836)-PF05768,SUPERFAMILY--SSF52833, at 126,542 to 126,978 13821 mRNA_5454: 13822 - KOG2673 Uncharacterized conserved protein, contains PSP domain, at 127,145 to 127,753 13822 mRNA_5455: 13823 - PRINTS-Proline rich extensin signature-PR01217, at 127,817 to 128,320 13823 mRNA_5456: 13824 - K07034 K07034 uncharacterized protein, at 129,299 to 130,839 13824 mRNA_5457: 13825 - KOG2533 Permease of the major facilitator superfamily, at 132,935 to 135,021 13825 mRNA_5458: 13826 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 135,775 to 137,466 13826 mRNA_5459: 13827 - K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4, at 137,712 to 142,307 13827
Locus Name Description Strand Phenotype
mRNA_5449 13817 HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 - cofit
mRNA_5450 13818 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) - cofit
mRNA_5451 13819 Hypothetical Protein + insig.
mRNA_5452 13820 HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630 + cofit
mRNA_5453 13821 HMMPfam-Glutaredoxin-like domain (DUF836)-PF05768,SUPERFAMILY--SSF52833 + no data
mRNA_5454 13822 KOG2673 Uncharacterized conserved protein, contains PSP domain + cofit
mRNA_5455 13823 PRINTS-Proline rich extensin signature-PR01217 + no data
mRNA_5456 13824 K07034 K07034 uncharacterized protein + cofit
mRNA_5457 13825 KOG2533 Permease of the major facilitator superfamily - cofit
mRNA_5458 13826 BLAST expressed protein [Cryptococcus neoformans var. neofo... + cofit
mRNA_5459 13827 K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4 - cofit

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