Gene info for mRNA_5458 in Rhodosporidium toruloides IFO0880

Name: 13826
Annotation: BLAST expressed protein [Cryptococcus neoformans var. neofo...
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 135,775 to 137,466
See nucleotide sequence around mRNA_5458 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13821 and 13822 are separated by 166 nucleotides13822 and 13823 are separated by 63 nucleotides13823 and 13824 are separated by 978 nucleotides13824 and 13825 are separated by 2095 nucleotides13825 and 13826 are separated by 753 nucleotides13826 and 13827 are separated by 245 nucleotides13827 and 13828 are separated by 453 nucleotides13828 and 13829 are separated by 562 nucleotides13829 and 13830 are separated by 331 nucleotides13830 and 13831 are separated by 550 nucleotides mRNA_5453: 13821 - HMMPfam-Glutaredoxin-like domain (DUF836)-PF05768,SUPERFAMILY--SSF52833, at 126,542 to 126,978 13821 mRNA_5454: 13822 - KOG2673 Uncharacterized conserved protein, contains PSP domain, at 127,145 to 127,753 13822 mRNA_5455: 13823 - PRINTS-Proline rich extensin signature-PR01217, at 127,817 to 128,320 13823 mRNA_5456: 13824 - K07034 K07034 uncharacterized protein, at 129,299 to 130,839 13824 mRNA_5457: 13825 - KOG2533 Permease of the major facilitator superfamily, at 132,935 to 135,021 13825 mRNA_5458: 13826 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 135,775 to 137,466 13826 mRNA_5459: 13827 - K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4, at 137,712 to 142,307 13827 mRNA_5460: 13828 - Hypothetical Protein, at 142,761 to 144,304 13828 mRNA_5461: 13829 - KOG1721 FOG Zn-finger, at 144,867 to 148,106 13829 mRNA_5462: 13830 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 148,438 to 149,863 13830 mRNA_5463: 13831 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 150,414 to 154,047 13831
Locus Name Description Strand Phenotype
mRNA_5453 13821 HMMPfam-Glutaredoxin-like domain (DUF836)-PF05768,SUPERFAMILY--SSF52833 + no data
mRNA_5454 13822 KOG2673 Uncharacterized conserved protein, contains PSP domain + cofit
mRNA_5455 13823 PRINTS-Proline rich extensin signature-PR01217 + no data
mRNA_5456 13824 K07034 K07034 uncharacterized protein + cofit
mRNA_5457 13825 KOG2533 Permease of the major facilitator superfamily - cofit
mRNA_5458 13826 BLAST expressed protein [Cryptococcus neoformans var. neofo... + cofit
mRNA_5459 13827 K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4 - cofit
mRNA_5460 13828 Hypothetical Protein - cofit
mRNA_5461 13829 KOG1721 FOG Zn-finger + cofit
mRNA_5462 13830 HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321 - cofit
mRNA_5463 13831 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - cofit

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