Gene info for mRNA_5465 in Rhodosporidium toruloides IFO0880

Name: 13833
Annotation: Hypothetical Protein
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 156,189 to 157,604
See nucleotide sequence around mRNA_5465 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13828 and 13829 are separated by 562 nucleotides13829 and 13830 are separated by 331 nucleotides13830 and 13831 are separated by 550 nucleotides13831 and 13832 are separated by 953 nucleotides13832 and 13833 are separated by 407 nucleotides13833 and 13834 are separated by 203 nucleotides13834 and 13835 are separated by 1639 nucleotides13835 and 13836 are separated by 5 nucleotides13836 and 13837 are separated by 104 nucleotides13837 and 13838 are separated by 220 nucleotides mRNA_5460: 13828 - Hypothetical Protein, at 142,761 to 144,304 13828 mRNA_5461: 13829 - KOG1721 FOG Zn-finger, at 144,867 to 148,106 13829 mRNA_5462: 13830 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 148,438 to 149,863 13830 mRNA_5463: 13831 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 150,414 to 154,047 13831 mRNA_5464: 13832 - K09579 PIN4 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, at 155,001 to 155,781 13832 mRNA_5465: 13833 - Hypothetical Protein, at 156,189 to 157,604 13833 mRNA_5466: 13834 - K05841 E2.4.1.173 sterol 3beta-glucosyltransferase, at 157,808 to 163,476 13834 mRNA_5467: 13835 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 165,116 to 166,451 13835 mRNA_5468: 13836 - Hypothetical Protein, at 166,457 to 167,011 13836 mRNA_5469: 13837 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 167,116 to 168,617 13837 mRNA_5470: 13838 - K00599 METTL6 methyltransferase-like protein 6, at 168,838 to 170,246 13838
Locus Name Description Strand Phenotype
mRNA_5460 13828 Hypothetical Protein - cofit
mRNA_5461 13829 KOG1721 FOG Zn-finger + cofit
mRNA_5462 13830 HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321 - cofit
mRNA_5463 13831 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 - cofit
mRNA_5464 13832 K09579 PIN4 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 - no data
mRNA_5465 13833 Hypothetical Protein + cofit
mRNA_5466 13834 K05841 E2.4.1.173 sterol 3beta-glucosyltransferase - insig.
mRNA_5467 13835 KOG4391 Predicted alpha/beta hydrolase BEM46 + insig.
mRNA_5468 13836 Hypothetical Protein - cofit
mRNA_5469 13837 HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321 + cofit
mRNA_5470 13838 K00599 METTL6 methyltransferase-like protein 6 - cofit

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