Gene info for mRNA_5472 in Rhodosporidium toruloides IFO0880

Name: 13840
Annotation: K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 173,167 to 176,789
See nucleotide sequence around mRNA_5472 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13835 and 13836 are separated by 5 nucleotides13836 and 13837 are separated by 104 nucleotides13837 and 13838 are separated by 220 nucleotides13838 and 13839 are separated by 516 nucleotides13839 and 13840 are separated by 381 nucleotides13840 and 13841 are separated by 137 nucleotides13841 and 13842 are separated by 278 nucleotides13842 and 13843 are separated by 158 nucleotides13843 and 13844 are separated by 438 nucleotides13844 and 13845 are separated by 269 nucleotides mRNA_5467: 13835 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 165,116 to 166,451 13835 mRNA_5468: 13836 - Hypothetical Protein, at 166,457 to 167,011 13836 mRNA_5469: 13837 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 167,116 to 168,617 13837 mRNA_5470: 13838 - K00599 METTL6 methyltransferase-like protein 6, at 168,838 to 170,246 13838 mRNA_5471: 13839 - KOG4696 Uncharacterized conserved protein, at 170,763 to 172,785 13839 mRNA_5472: 13840 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 173,167 to 176,789 13840 mRNA_5473: 13841 - KOG2226 Proteins containing regions of low-complexity, at 176,927 to 180,681 13841 mRNA_5474: 13842 - HMMPfam-Mitochondrial ATP synthase epsilon chain-PF04627,SUPERFAMILY--SSF48690, at 180,960 to 181,593 13842 mRNA_5475: 13843 - KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins, at 181,752 to 183,361 13843 mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183,800 to 188,314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188,584 to 192,714 13845
Locus Name Description Strand Phenotype
mRNA_5467 13835 KOG4391 Predicted alpha/beta hydrolase BEM46 + insig.
mRNA_5468 13836 Hypothetical Protein - cofit
mRNA_5469 13837 HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321 + cofit
mRNA_5470 13838 K00599 METTL6 methyltransferase-like protein 6 - cofit
mRNA_5471 13839 KOG4696 Uncharacterized conserved protein + insig.
mRNA_5472 13840 K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase + no data
mRNA_5473 13841 KOG2226 Proteins containing regions of low-complexity - cofit
mRNA_5474 13842 HMMPfam-Mitochondrial ATP synthase epsilon chain-PF04627,SUPERFAMILY--SSF48690 + no data
mRNA_5475 13843 KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins + cofit
mRNA_5476 13844 KOG4719 Nuclear pore complex protein + cofit
mRNA_5477 13845 K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11 + cofit

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