Gene info for mRNA_5476 in Rhodosporidium toruloides IFO0880

Name: 13844
Annotation: KOG4719 Nuclear pore complex protein
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 183,800 to 188,314
See nucleotide sequence around mRNA_5476 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13839 and 13840 are separated by 381 nucleotides13840 and 13841 are separated by 137 nucleotides13841 and 13842 are separated by 278 nucleotides13842 and 13843 are separated by 158 nucleotides13843 and 13844 are separated by 438 nucleotides13844 and 13845 are separated by 269 nucleotides13845 and 13846 are separated by 151 nucleotides13846 and 13847 are separated by 396 nucleotides13847 and 13848 are separated by 2499 nucleotides13848 and 13849 are separated by 467 nucleotides mRNA_5471: 13839 - KOG4696 Uncharacterized conserved protein, at 170,763 to 172,785 13839 mRNA_5472: 13840 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 173,167 to 176,789 13840 mRNA_5473: 13841 - KOG2226 Proteins containing regions of low-complexity, at 176,927 to 180,681 13841 mRNA_5474: 13842 - HMMPfam-Mitochondrial ATP synthase epsilon chain-PF04627,SUPERFAMILY--SSF48690, at 180,960 to 181,593 13842 mRNA_5475: 13843 - KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins, at 181,752 to 183,361 13843 mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183,800 to 188,314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188,584 to 192,714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192,866 to 194,409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194,806 to 195,878 13847 mRNA_5480: 13848 - Hypothetical Protein, at 198,378 to 198,864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199,332 to 200,672 13849
Locus Name Description Strand Phenotype
mRNA_5471 13839 KOG4696 Uncharacterized conserved protein + insig.
mRNA_5472 13840 K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase + no data
mRNA_5473 13841 KOG2226 Proteins containing regions of low-complexity - cofit
mRNA_5474 13842 HMMPfam-Mitochondrial ATP synthase epsilon chain-PF04627,SUPERFAMILY--SSF48690 + no data
mRNA_5475 13843 KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins + cofit
mRNA_5476 13844 KOG4719 Nuclear pore complex protein + cofit
mRNA_5477 13845 K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11 + cofit
mRNA_5478 13846 SUPERFAMILY--SSF81383 + cofit
mRNA_5479 13847 KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing - insig.
mRNA_5480 13848 Hypothetical Protein - insig.
mRNA_5481 13849 KOG2710 Rho GTPase-activating protein - cofit

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