Gene info for mRNA_5483 in Rhodosporidium toruloides IFO0880

Name: 13851
Annotation: KOG1339 Aspartyl protease
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 202,681 to 205,111
See nucleotide sequence around mRNA_5483 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13846 and 13847 are separated by 396 nucleotides13847 and 13848 are separated by 2499 nucleotides13848 and 13849 are separated by 467 nucleotides13849 and 13850 are separated by 372 nucleotides13850 and 13851 are separated by 619 nucleotides13851 and 13852 are separated by 387 nucleotides13852 and 13853 are separated by 684 nucleotides13853 and 13854 are separated by 388 nucleotides13854 and 13855 are separated by 537 nucleotides13855 and 13856 are separated by 261 nucleotides mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192,866 to 194,409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194,806 to 195,878 13847 mRNA_5480: 13848 - Hypothetical Protein, at 198,378 to 198,864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199,332 to 200,672 13849 mRNA_5482: 13850 - Hypothetical Protein, at 201,045 to 202,061 13850 mRNA_5483: 13851 - KOG1339 Aspartyl protease, at 202,681 to 205,111 13851 mRNA_5484: 13852 - K16612 HOOK1 protein HOOK1, at 205,499 to 209,113 13852 mRNA_5485: 13853 - K02896 RP-L24e, RPL24 large subunit ribosomal protein L24e, at 209,798 to 210,668 13853 mRNA_5486: 13854 - K15695 RNF103, KF1 E3 ubiquitin-protein ligase RNF103, at 211,057 to 213,286 13854 mRNA_5487: 13855 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 213,824 to 214,622 13855 mRNA_5488: 13856 - K01078 E3.1.3.2 acid phosphatase, at 214,884 to 216,932 13856
Locus Name Description Strand Phenotype
mRNA_5478 13846 SUPERFAMILY--SSF81383 + cofit
mRNA_5479 13847 KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing - insig.
mRNA_5480 13848 Hypothetical Protein - insig.
mRNA_5481 13849 KOG2710 Rho GTPase-activating protein - cofit
mRNA_5482 13850 Hypothetical Protein - insig.
mRNA_5483 13851 KOG1339 Aspartyl protease + strong
mRNA_5484 13852 K16612 HOOK1 protein HOOK1 + cofit
mRNA_5485 13853 K02896 RP-L24e, RPL24 large subunit ribosomal protein L24e + no data
mRNA_5486 13854 K15695 RNF103, KF1 E3 ubiquitin-protein ligase RNF103 - insig.
mRNA_5487 13855 HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 + cofit
mRNA_5488 13856 K01078 E3.1.3.2 acid phosphatase - cofit

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