Gene info for mRNA_5500 in Rhodosporidium toruloides IFO0880

Name: 13868
Annotation: HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 242,489 to 245,110
See nucleotide sequence around mRNA_5500 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13863 and 13864 are separated by 455 nucleotides13864 and 13865 are separated by 2433 nucleotides13865 and 13866 are separated by 1518 nucleotides13866 and 13867 are separated by 379 nucleotides13867 and 13868 are separated by 382 nucleotides13868 and 13869 are separated by 271 nucleotides13869 and 13870 are separated by 152 nucleotides13870 and 13871 are separated by 1005 nucleotides13871 and 13872 are separated by 454 nucleotides13872 and 13873 are separated by 355 nucleotides mRNA_5495: 13863 - K10733 GINS2, PSF2 GINS complex subunit 2, at 229,312 to 230,460 13863 mRNA_5496: 13864 - HMMPfam-HSF-type DNA-binding-PF00447,SUPERFAMILY--SSF46785, at 230,916 to 233,624 13864 mRNA_5497: 13865 - KOG3872 FOG FHA domain, at 236,058 to 237,247 13865 mRNA_5498: 13866 - Hypothetical Protein, at 238,766 to 240,187 13866 mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240,567 to 242,106 13867 mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242,489 to 245,110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245,382 to 247,759 13869 mRNA_5502: 13870 - Hypothetical Protein, at 247,912 to 250,557 13870 mRNA_5503: 13871 - HMMPfam-Chitin synthase III catalytic subunit-PF12271, at 251,563 to 253,057 13871 mRNA_5504: 13872 - KOG4034 Uncharacterized conserved protein NOF (Neighbor of FAU), at 253,512 to 254,101 13872 mRNA_5505: 13873 - KOG0297 TNF receptor-associated factor, at 254,457 to 255,755 13873
Locus Name Description Strand Phenotype
mRNA_5495 13863 K10733 GINS2, PSF2 GINS complex subunit 2 + no data
mRNA_5496 13864 HMMPfam-HSF-type DNA-binding-PF00447,SUPERFAMILY--SSF46785 + cofit
mRNA_5497 13865 KOG3872 FOG FHA domain + insig.
mRNA_5498 13866 Hypothetical Protein + cofit
mRNA_5499 13867 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - cofit
mRNA_5500 13868 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695 + insig.
mRNA_5501 13869 Hypothetical Protein - cofit
mRNA_5502 13870 Hypothetical Protein - insig.
mRNA_5503 13871 HMMPfam-Chitin synthase III catalytic subunit-PF12271 + cofit
mRNA_5504 13872 KOG4034 Uncharacterized conserved protein NOF (Neighbor of FAU) - no data
mRNA_5505 13873 KOG0297 TNF receptor-associated factor - cofit

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