Gene info for mRNA_5523 in Rhodosporidium toruloides IFO0880

Name: 13891
Annotation: ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 295,158 to 296,227
See nucleotide sequence around mRNA_5523 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13886 and 13887 are separated by 666 nucleotides13887 and 13888 are separated by 464 nucleotides13888 and 13889 are separated by 482 nucleotides13889 and 13890 are separated by 489 nucleotides13890 and 13891 are separated by 484 nucleotides13891 and 13892 are separated by 844 nucleotides13892 and 13893 are separated by 852 nucleotides13893 and 13894 are separated by 239 nucleotides13894 and 13895 are separated by 420 nucleotides13895 and 13896 are separated by 279 nucleotides mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287,492 to 288,002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288,669 to 289,832 13887 mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290,297 to 291,417 13888 mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291,900 to 293,030 13889 mRNA_5522: 13890 - ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 293,520 to 294,673 13890 mRNA_5523: 13891 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 295,158 to 296,227 13891 mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297,072 to 298,317 13892 mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299,170 to 301,469 13893 mRNA_5526: 13894 - K00052 leuB 3-isopropylmalate dehydrogenase, at 301,709 to 303,276 13894 mRNA_5527: 13895 - K11883 NOB1 RNA-binding protein NOB1, at 303,697 to 305,493 13895 mRNA_5528: 13896 - HMMPfam-Protein of unknown function (DUF2416)-PF10315, at 305,773 to 306,425 13896
Locus Name Description Strand Phenotype
mRNA_5518 13886 SUPERFAMILY--SSF49599 - cofit
mRNA_5519 13887 HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145 - cofit
mRNA_5520 13888 KOG0297 TNF receptor-associated factor - cofit
mRNA_5521 13889 ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850 - cofit
mRNA_5522 13890 ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145 - insig.
mRNA_5523 13891 ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850 - cofit
mRNA_5524 13892 KOG3002 Zn finger protein - cofit
mRNA_5525 13893 HMMPfam-Xyloglucan fucosyltransferase-PF03254 + cofit
mRNA_5526 13894 K00052 leuB 3-isopropylmalate dehydrogenase - no data
mRNA_5527 13895 K11883 NOB1 RNA-binding protein NOB1 + no data
mRNA_5528 13896 HMMPfam-Protein of unknown function (DUF2416)-PF10315 - cofit

Or browse nearby genes

Or see the comparative fitness browser