Gene info for mRNA_5555 in Rhodosporidium toruloides IFO0880

Name: 13923
Annotation: K19984 EXOC5, SEC10 exocyst complex component 5
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 369,453 to 373,843
See nucleotide sequence around mRNA_5555 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13918 and 13919 are separated by 343 nucleotides13919 and 13920 are separated by 872 nucleotides13920 and 13921 are separated by 201 nucleotides13921 and 13922 are separated by 602 nucleotides13922 and 13923 are separated by 199 nucleotides13923 and 13924 are separated by 387 nucleotides13924 and 13925 are separated by 323 nucleotides13925 and 13926 are separated by 435 nucleotides13926 and 13927 are separated by 86 nucleotides13927 and 13928 are separated by 80 nucleotides mRNA_5550: 13918 - K09424 REB1 Myb-like DNA-binding protein REB1, at 353,365 to 355,997 13918 mRNA_5551: 13919 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 356,341 to 358,990 13919 mRNA_5552: 13920 - K03360 GRR1 F-box and leucine-rich repeat protein GRR1, at 359,863 to 362,993 13920 mRNA_5553: 13921 - K20791 NAA10_11, ARD1_2 N-alpha-acetyltransferase 10/11, at 363,195 to 364,083 13921 mRNA_5554: 13922 - KOG0979 Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily, at 364,686 to 369,253 13922 mRNA_5555: 13923 - K19984 EXOC5, SEC10 exocyst complex component 5, at 369,453 to 373,843 13923 mRNA_5556: 13924 - KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion, at 374,231 to 375,171 13924 mRNA_5557: 13925 - K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, at 375,495 to 376,430 13925 mRNA_5558: 13926 - KOG3328 HGG motif-containing thioesterase, at 376,866 to 377,685 13926 mRNA_5559: 13927 - KOG2406 MADS box transcription factor, at 377,772 to 380,881 13927 mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380,962 to 381,944 13928
Locus Name Description Strand Phenotype
mRNA_5550 13918 K09424 REB1 Myb-like DNA-binding protein REB1 - cofit
mRNA_5551 13919 ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112 - cofit
mRNA_5552 13920 K03360 GRR1 F-box and leucine-rich repeat protein GRR1 + cofit
mRNA_5553 13921 K20791 NAA10_11, ARD1_2 N-alpha-acetyltransferase 10/11 - no data
mRNA_5554 13922 KOG0979 Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily - no data
mRNA_5555 13923 K19984 EXOC5, SEC10 exocyst complex component 5 + cofit
mRNA_5556 13924 KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion - no data
mRNA_5557 13925 K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 - strong
mRNA_5558 13926 KOG3328 HGG motif-containing thioesterase + cofit
mRNA_5559 13927 KOG2406 MADS box transcription factor - no data
mRNA_5560 13928 BLAST PROTEIN D2013.6 [Ceraceosorus bombacis] + cofit

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