Gene info for mRNA_5560 in Rhodosporidium toruloides IFO0880

Name: 13928
Annotation: BLAST PROTEIN D2013.6 [Ceraceosorus bombacis]
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 380,962 to 381,944
See nucleotide sequence around mRNA_5560 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13923 and 13924 are separated by 387 nucleotides13924 and 13925 are separated by 323 nucleotides13925 and 13926 are separated by 435 nucleotides13926 and 13927 are separated by 86 nucleotides13927 and 13928 are separated by 80 nucleotides13928 and 13929 are separated by 689 nucleotides13929 and 13930 are separated by 200 nucleotides13930 and 13931 are separated by 384 nucleotides13931 and 13932 are separated by 101 nucleotides13932 and 13933 are separated by 1200 nucleotides mRNA_5555: 13923 - K19984 EXOC5, SEC10 exocyst complex component 5, at 369,453 to 373,843 13923 mRNA_5556: 13924 - KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion, at 374,231 to 375,171 13924 mRNA_5557: 13925 - K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, at 375,495 to 376,430 13925 mRNA_5558: 13926 - KOG3328 HGG motif-containing thioesterase, at 376,866 to 377,685 13926 mRNA_5559: 13927 - KOG2406 MADS box transcription factor, at 377,772 to 380,881 13927 mRNA_5560: 13928 - BLAST PROTEIN D2013.6 [Ceraceosorus bombacis], at 380,962 to 381,944 13928 mRNA_5561: 13929 - Hypothetical Protein, at 382,634 to 383,572 13929 mRNA_5562: 13930 - KOG0257 Kynurenine aminotransferase, glutamine transaminase K, at 383,773 to 385,239 13930 mRNA_5563: 13931 - K10756 RFC3_5 replication factor C subunit 3/5, at 385,624 to 387,371 13931 mRNA_5564: 13932 - HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197, at 387,473 to 390,458 13932 mRNA_5565: 13933 - KOG3033 Predicted PhzC/PhzF-type epimerase, at 391,659 to 392,676 13933
Locus Name Description Strand Phenotype
mRNA_5555 13923 K19984 EXOC5, SEC10 exocyst complex component 5 + cofit
mRNA_5556 13924 KOG4580 Component of vacuolar transporter chaperone (Vtc) involved in vacuole fusion - no data
mRNA_5557 13925 K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 - strong
mRNA_5558 13926 KOG3328 HGG motif-containing thioesterase + cofit
mRNA_5559 13927 KOG2406 MADS box transcription factor - no data
mRNA_5560 13928 BLAST PROTEIN D2013.6 [Ceraceosorus bombacis] + cofit
mRNA_5561 13929 Hypothetical Protein + cofit
mRNA_5562 13930 KOG0257 Kynurenine aminotransferase, glutamine transaminase K - cofit
mRNA_5563 13931 K10756 RFC3_5 replication factor C subunit 3/5 + no data
mRNA_5564 13932 HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197 - cofit
mRNA_5565 13933 KOG3033 Predicted PhzC/PhzF-type epimerase + cofit

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