Gene info for mRNA_5609 in Rhodosporidium toruloides IFO0880

Name: 13977
Annotation: HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 502,227 to 504,581
See nucleotide sequence around mRNA_5609 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13972 and 13973 are separated by 411 nucleotides13973 and 13974 are separated by 159 nucleotides13974 and 13975 are separated by 503 nucleotides13975 and 13976 are separated by 1241 nucleotides13976 and 13977 are separated by 369 nucleotides13977 and 13978 are separated by 88 nucleotides13978 and 13979 are separated by 266 nucleotides13979 and 13980 are separated by 149 nucleotides13980 and 13981 are separated by 247 nucleotides13981 and 13982 are separated by 758 nucleotides mRNA_5604: 13972 - Hypothetical Protein, at 487,257 to 489,515 13972 mRNA_5605: 13973 - Hypothetical Protein, at 489,927 to 490,531 13973 mRNA_5606: 13974 - HMMPfam-Glycosyl hydrolase family 61-PF03443, at 490,691 to 492,139 13974 mRNA_5607: 13975 - HMMPfam-rRNA processing-PF08524, at 492,643 to 493,643 13975 mRNA_5608: 13976 - K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1, at 494,885 to 501,857 13976 mRNA_5609: 13977 - HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058, at 502,227 to 504,581 13977 mRNA_5610: 13978 - KOG1611 Predicted short chain-type dehydrogenase, at 504,670 to 507,396 13978 mRNA_5611: 13979 - HMMPfam-Protein of unknown function (DUF2433)-PF10360, at 507,663 to 510,497 13979 mRNA_5612: 13980 - K14213 PEPD Xaa-Pro dipeptidase, at 510,647 to 512,391 13980 mRNA_5613: 13981 - K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5, at 512,639 to 514,652 13981 mRNA_5614: 13982 - BLAST Zinc finger protein DZIP1L [Rhizoctonia solani], at 515,411 to 519,507 13982
Locus Name Description Strand Phenotype
mRNA_5604 13972 Hypothetical Protein + cofit
mRNA_5605 13973 Hypothetical Protein + no data
mRNA_5606 13974 HMMPfam-Glycosyl hydrolase family 61-PF03443 - cofit
mRNA_5607 13975 HMMPfam-rRNA processing-PF08524 + cofit
mRNA_5608 13976 K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1 - cofit
mRNA_5609 13977 HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058 + cofit
mRNA_5610 13978 KOG1611 Predicted short chain-type dehydrogenase - insig.
mRNA_5611 13979 HMMPfam-Protein of unknown function (DUF2433)-PF10360 + cofit
mRNA_5612 13980 K14213 PEPD Xaa-Pro dipeptidase - cofit
mRNA_5613 13981 K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5 - no data
mRNA_5614 13982 BLAST Zinc finger protein DZIP1L [Rhizoctonia solani] + cofit

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