Gene info for mRNA_5613 in Rhodosporidium toruloides IFO0880

Name: 13981
Annotation: K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 512,639 to 514,652
See nucleotide sequence around mRNA_5613 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13976 and 13977 are separated by 369 nucleotides13977 and 13978 are separated by 88 nucleotides13978 and 13979 are separated by 266 nucleotides13979 and 13980 are separated by 149 nucleotides13980 and 13981 are separated by 247 nucleotides13981 and 13982 are separated by 758 nucleotides13982 and 13983 are separated by 436 nucleotides13983 and 13984 are separated by 550 nucleotides13984 and 13985 are separated by 383 nucleotides13985 and 13986 are separated by 539 nucleotides mRNA_5608: 13976 - K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1, at 494,885 to 501,857 13976 mRNA_5609: 13977 - HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058, at 502,227 to 504,581 13977 mRNA_5610: 13978 - KOG1611 Predicted short chain-type dehydrogenase, at 504,670 to 507,396 13978 mRNA_5611: 13979 - HMMPfam-Protein of unknown function (DUF2433)-PF10360, at 507,663 to 510,497 13979 mRNA_5612: 13980 - K14213 PEPD Xaa-Pro dipeptidase, at 510,647 to 512,391 13980 mRNA_5613: 13981 - K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5, at 512,639 to 514,652 13981 mRNA_5614: 13982 - BLAST Zinc finger protein DZIP1L [Rhizoctonia solani], at 515,411 to 519,507 13982 mRNA_5615: 13983 - HMMPfam-GRF zinc finger-PF06839, at 519,944 to 520,866 13983 mRNA_5616: 13984 - HMMPfam-GRF zinc finger-PF06839, at 521,417 to 522,202 13984 mRNA_5617: 13985 - BLAST beta-flanking protein [Kwoniella dejecticola CBS ..., at 522,586 to 523,883 13985 mRNA_5618: 13986 - K09866 AQP4 aquaporin-4, at 524,423 to 526,190 13986
Locus Name Description Strand Phenotype
mRNA_5608 13976 K03018 RPC1, POLR3A DNA-directed RNA polymerase III subunit RPC1 - cofit
mRNA_5609 13977 HMMPfam-Leucine Rich Repeat-PF00560,ProSiteProfiles-Leucine-rich repeat profile.-PS51450,SMART-Leucine-rich repeats, typical (most populated) subfamily-SM00369,SUPERFAMILY--SSF52058 + cofit
mRNA_5610 13978 KOG1611 Predicted short chain-type dehydrogenase - insig.
mRNA_5611 13979 HMMPfam-Protein of unknown function (DUF2433)-PF10360 + cofit
mRNA_5612 13980 K14213 PEPD Xaa-Pro dipeptidase - cofit
mRNA_5613 13981 K03035 PSMD12, RPN5 26S proteasome regulatory subunit N5 - no data
mRNA_5614 13982 BLAST Zinc finger protein DZIP1L [Rhizoctonia solani] + cofit
mRNA_5615 13983 HMMPfam-GRF zinc finger-PF06839 - cofit
mRNA_5616 13984 HMMPfam-GRF zinc finger-PF06839 - cofit
mRNA_5617 13985 BLAST beta-flanking protein [Kwoniella dejecticola CBS ... + cofit
mRNA_5618 13986 K09866 AQP4 aquaporin-4 + cofit

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