Gene info for mRNA_5628 in Rhodosporidium toruloides IFO0880

Name: 13996
Annotation: SUPERFAMILY--SSF57997
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 541,523 to 547,167
See nucleotide sequence around mRNA_5628 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13991 and 13992 are separated by 616 nucleotides13992 and 13993 are separated by 774 nucleotides13993 and 13994 are separated by 647 nucleotides13994 and 13995 are separated by 94 nucleotides13995 and 13996 are separated by 162 nucleotides13996 and 13997 are separated by 368 nucleotides13997 and 13998 are separated by 207 nucleotides13998 and 13999 are separated by 428 nucleotides13999 and 14000 are separated by 388 nucleotides14000 and 14001 are separated by 642 nucleotides mRNA_5623: 13991 - KOG3393 Predicted membrane protein, at 534,281 to 535,136 13991 mRNA_5624: 13992 - KOG1611 Predicted short chain-type dehydrogenase, at 535,753 to 536,555 13992 mRNA_5625: 13993 - KOG1611 Predicted short chain-type dehydrogenase, at 537,330 to 538,157 13993 mRNA_5626: 13994 - KOG1611 Predicted short chain-type dehydrogenase, at 538,805 to 539,634 13994 mRNA_5627: 13995 - K10756 RFC3_5 replication factor C subunit 3/5, at 539,729 to 541,360 13995 mRNA_5628: 13996 - SUPERFAMILY--SSF57997, at 541,523 to 547,167 13996 mRNA_5629: 13997 - K15430 TRM11, TRMT11 tRNA (guanine10-N2)-methyltransferase, at 547,536 to 549,644 13997 mRNA_5630: 13998 - HMMPfam-SUR7/PalI family-PF06687, at 549,852 to 551,893 13998 mRNA_5631: 13999 - KOG4197 FOG PPR repeat, at 552,322 to 556,680 13999 mRNA_5632: 14000 - Hypothetical Protein, at 557,069 to 557,641 14000 mRNA_5633: 14001 - K01679 E4.2.1.2B, fumC fumarate hydratase, class II, at 558,284 to 560,290 14001
Locus Name Description Strand Phenotype
mRNA_5623 13991 KOG3393 Predicted membrane protein - cofit
mRNA_5624 13992 KOG1611 Predicted short chain-type dehydrogenase + cofit
mRNA_5625 13993 KOG1611 Predicted short chain-type dehydrogenase + cofit
mRNA_5626 13994 KOG1611 Predicted short chain-type dehydrogenase + cofit
mRNA_5627 13995 K10756 RFC3_5 replication factor C subunit 3/5 - no data
mRNA_5628 13996 SUPERFAMILY--SSF57997 - insig.
mRNA_5629 13997 K15430 TRM11, TRMT11 tRNA (guanine10-N2)-methyltransferase + cofit
mRNA_5630 13998 HMMPfam-SUR7/PalI family-PF06687 - cofit
mRNA_5631 13999 KOG4197 FOG PPR repeat + cofit
mRNA_5632 14000 Hypothetical Protein + cofit
mRNA_5633 14001 K01679 E4.2.1.2B, fumC fumarate hydratase, class II + no data

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