Gene info for mRNA_5636 in Rhodosporidium toruloides IFO0880

Name: 14004
Annotation: BLAST Regulator of phospholipase D SRF1 [Hypsizygus marmoreus]
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 564,941 to 566,584
See nucleotide sequence around mRNA_5636 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 13999 and 14000 are separated by 388 nucleotides14000 and 14001 are separated by 642 nucleotides14001 and 14002 are separated by 322 nucleotides14002 and 14003 are separated by 595 nucleotides14003 and 14004 are separated by 273 nucleotides14004 and 14005 are separated by 290 nucleotides14005 and 14006 are separated by 298 nucleotides14006 and 14007 are separated by 217 nucleotides14007 and 14008 are separated by 769 nucleotides14008 and 14009 are separated by 161 nucleotides mRNA_5631: 13999 - KOG4197 FOG PPR repeat, at 552,322 to 556,680 13999 mRNA_5632: 14000 - Hypothetical Protein, at 557,069 to 557,641 14000 mRNA_5633: 14001 - K01679 E4.2.1.2B, fumC fumarate hydratase, class II, at 558,284 to 560,290 14001 mRNA_5634: 14002 - K00750 GYG1, GYG2 glycogenin, at 560,613 to 563,450 14002 mRNA_5635: 14003 - HMMPfam-Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-PF15159, at 564,046 to 564,667 14003 mRNA_5636: 14004 - BLAST Regulator of phospholipase D SRF1 [Hypsizygus marmoreus], at 564,941 to 566,584 14004 mRNA_5637: 14005 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 566,875 to 570,624 14005 mRNA_5638: 14006 - Hypothetical Protein, at 570,923 to 572,239 14006 mRNA_5639: 14007 - SUPERFAMILY--SSF52047, at 572,457 to 573,872 14007 mRNA_5640: 14008 - BLAST putative acyl- dehydrogenase [Moniliophthora rore..., at 574,642 to 575,900 14008 mRNA_5641: 14009 - K02879 RP-L17, MRPL17, rplQ large subunit ribosomal protein L17, at 576,062 to 577,225 14009
Locus Name Description Strand Phenotype
mRNA_5631 13999 KOG4197 FOG PPR repeat + cofit
mRNA_5632 14000 Hypothetical Protein + cofit
mRNA_5633 14001 K01679 E4.2.1.2B, fumC fumarate hydratase, class II + no data
mRNA_5634 14002 K00750 GYG1, GYG2 glycogenin + cofit
mRNA_5635 14003 HMMPfam-Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-PF15159 - no data
mRNA_5636 14004 BLAST Regulator of phospholipase D SRF1 [Hypsizygus marmoreus] - cofit
mRNA_5637 14005 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - cofit
mRNA_5638 14006 Hypothetical Protein + cofit
mRNA_5639 14007 SUPERFAMILY--SSF52047 + insig.
mRNA_5640 14008 BLAST putative acyl- dehydrogenase [Moniliophthora rore... + cofit
mRNA_5641 14009 K02879 RP-L17, MRPL17, rplQ large subunit ribosomal protein L17 - no data

Or browse nearby genes

Or see the comparative fitness browser