Gene info for mRNA_5641 in Rhodosporidium toruloides IFO0880

Name: 14009
Annotation: K02879 RP-L17, MRPL17, rplQ large subunit ribosomal protein L17
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 576,062 to 577,225
See nucleotide sequence around mRNA_5641 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14004 and 14005 are separated by 290 nucleotides14005 and 14006 are separated by 298 nucleotides14006 and 14007 are separated by 217 nucleotides14007 and 14008 are separated by 769 nucleotides14008 and 14009 are separated by 161 nucleotides14009 and 14010 are separated by 304 nucleotides14010 and 14011 are separated by 306 nucleotides14011 and 14012 are separated by 2863 nucleotides14012 and 14013 are separated by 269 nucleotides14013 and 14014 are separated by 210 nucleotides mRNA_5636: 14004 - BLAST Regulator of phospholipase D SRF1 [Hypsizygus marmoreus], at 564,941 to 566,584 14004 mRNA_5637: 14005 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 566,875 to 570,624 14005 mRNA_5638: 14006 - Hypothetical Protein, at 570,923 to 572,239 14006 mRNA_5639: 14007 - SUPERFAMILY--SSF52047, at 572,457 to 573,872 14007 mRNA_5640: 14008 - BLAST putative acyl- dehydrogenase [Moniliophthora rore..., at 574,642 to 575,900 14008 mRNA_5641: 14009 - K02879 RP-L17, MRPL17, rplQ large subunit ribosomal protein L17, at 576,062 to 577,225 14009 mRNA_5642: 14010 - Interpro Mitochondrial inner-membrane-bound regulator, at 577,530 to 579,606 14010 mRNA_5643: 14011 - BLAST Ras-related protein Rab-44 [Buceros rhinoceros silves..., at 579,913 to 580,872 14011 mRNA_5644: 14012 - Hypothetical Protein, at 583,736 to 584,443 14012 mRNA_5645: 14013 - BLAST putative alkaline phosphatase [Phaeomoniella chlamydo..., at 584,713 to 586,254 14013 mRNA_5646: 14014 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 586,465 to 587,964 14014
Locus Name Description Strand Phenotype
mRNA_5636 14004 BLAST Regulator of phospholipase D SRF1 [Hypsizygus marmoreus] - cofit
mRNA_5637 14005 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - cofit
mRNA_5638 14006 Hypothetical Protein + cofit
mRNA_5639 14007 SUPERFAMILY--SSF52047 + insig.
mRNA_5640 14008 BLAST putative acyl- dehydrogenase [Moniliophthora rore... + cofit
mRNA_5641 14009 K02879 RP-L17, MRPL17, rplQ large subunit ribosomal protein L17 - no data
mRNA_5642 14010 Interpro Mitochondrial inner-membrane-bound regulator + cofit
mRNA_5643 14011 BLAST Ras-related protein Rab-44 [Buceros rhinoceros silves... + cofit
mRNA_5644 14012 Hypothetical Protein + cofit
mRNA_5645 14013 BLAST putative alkaline phosphatase [Phaeomoniella chlamydo... - insig.
mRNA_5646 14014 K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase - cofit

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