Gene info for mRNA_5689 in Rhodosporidium toruloides IFO0880

Name: 14057
Annotation: KOG4206 Spliceosomal protein snRNP-U1A/U2B
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 698,626 to 699,781
See nucleotide sequence around mRNA_5689 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14052 and 14053 are separated by 108 nucleotides14053 and 14054 are separated by 139 nucleotides14054 and 14055 are separated by 340 nucleotides14055 and 14056 are separated by 269 nucleotides14056 and 14057 are separated by 121 nucleotides14057 and 14058 are separated by 279 nucleotides14058 and 14059 are separated by 67 nucleotides14059 and 14060 are separated by 113 nucleotides14060 and 14061 are separated by 343 nucleotides14061 and 14062 are separated by 244 nucleotides mRNA_5684: 14052 - K07404 pgl 6-phosphogluconolactonase, at 687,998 to 689,292 14052 mRNA_5685: 14053 - HMMPfam-Complex 1 protein (LYR family)-PF05347, at 689,401 to 690,702 14053 mRNA_5686: 14054 - K05294 PGAP1 glycosylphosphatidylinositol deacylase, at 690,842 to 694,591 14054 mRNA_5687: 14055 - K08764 SCP2, SCPX sterol carrier protein 2, at 694,932 to 696,791 14055 mRNA_5688: 14056 - K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1, at 697,061 to 698,504 14056 mRNA_5689: 14057 - KOG4206 Spliceosomal protein snRNP-U1A/U2B, at 698,626 to 699,781 14057 mRNA_5690: 14058 - K17710 PTCD1 pentatricopeptide repeat domain-containing protein 1, at 700,061 to 702,418 14058 mRNA_5691: 14059 - K05956 RABGGTB geranylgeranyl transferase type-2 subunit beta, at 702,486 to 703,817 14059 mRNA_5692: 14060 - K07342 SEC61G, SSS1, secE protein transport protein SEC61 subunit gamma and related proteins, at 703,931 to 704,550 14060 mRNA_5693: 14061 - KOG4186 Peroxisomal biogenesis protein (peroxin), at 704,894 to 706,050 14061 mRNA_5694: 14062 - HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF13883,SUPERFAMILY--SSF50475, at 706,295 to 707,436 14062
Locus Name Description Strand Phenotype
mRNA_5684 14052 K07404 pgl 6-phosphogluconolactonase - cofit
mRNA_5685 14053 HMMPfam-Complex 1 protein (LYR family)-PF05347 - no data
mRNA_5686 14054 K05294 PGAP1 glycosylphosphatidylinositol deacylase + cofit
mRNA_5687 14055 K08764 SCP2, SCPX sterol carrier protein 2 + cofit
mRNA_5688 14056 K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1 + cofit
mRNA_5689 14057 KOG4206 Spliceosomal protein snRNP-U1A/U2B + cofit
mRNA_5690 14058 K17710 PTCD1 pentatricopeptide repeat domain-containing protein 1 + no data
mRNA_5691 14059 K05956 RABGGTB geranylgeranyl transferase type-2 subunit beta - no data
mRNA_5692 14060 K07342 SEC61G, SSS1, secE protein transport protein SEC61 subunit gamma and related proteins + no data
mRNA_5693 14061 KOG4186 Peroxisomal biogenesis protein (peroxin) - strong
mRNA_5694 14062 HMMPfam-Pyridoxamine 5'-phosphate oxidase-PF13883,SUPERFAMILY--SSF50475 + cofit

Or browse nearby genes

Or see the comparative fitness browser