Gene info for mRNA_5797 in Rhodosporidium toruloides IFO0880

Name: 14165
Annotation: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 962,183 to 965,371
See nucleotide sequence around mRNA_5797 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14160 and 14161 are separated by 174 nucleotides14161 and 14162 are separated by 364 nucleotides14162 and 14163 are separated by 295 nucleotides14163 and 14164 overlap by 20 nucleotides14164 and 14165 are separated by 1613 nucleotides14165 and 14166 are separated by 256 nucleotides14166 and 14167 are separated by 216 nucleotides14167 and 14168 are separated by 334 nucleotides14168 and 14169 are separated by 265 nucleotides14169 and 14170 are separated by 156 nucleotides mRNA_5792: 14160 - K10755 RFC2_4 replication factor C subunit 2/4, at 949,558 to 951,302 14160 mRNA_5793: 14161 - K10581 UBE2O ubiquitin-conjugating enzyme E2 O, at 951,477 to 955,108 14161 mRNA_5794: 14162 - K01637 E4.1.3.1, aceA isocitrate lyase, at 955,473 to 957,559 14162 mRNA_5795: 14163 - KOG4842 Protein involved in sister chromatid separation and/or segregation, at 957,855 to 959,394 14163 mRNA_5796: 14164 - BLAST Protein of unknown function DUF4598 [Xanthophyllomyce..., at 959,375 to 960,569 14164 mRNA_5797: 14165 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 962,183 to 965,371 14165 mRNA_5798: 14166 - KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein, at 965,628 to 966,973 14166 mRNA_5799: 14167 - K09540 SEC63, DNAJC23 translocation protein SEC63, at 967,190 to 969,688 14167 mRNA_5800: 14168 - K11801 WDR23 WD repeat-containing protein 23, at 970,023 to 972,593 14168 mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972,859 to 974,663 14169 mRNA_5802: 14170 - K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase, at 974,820 to 975,968 14170
Locus Name Description Strand Phenotype
mRNA_5792 14160 K10755 RFC2_4 replication factor C subunit 2/4 - no data
mRNA_5793 14161 K10581 UBE2O ubiquitin-conjugating enzyme E2 O + insig.
mRNA_5794 14162 K01637 E4.1.3.1, aceA isocitrate lyase + cofit
mRNA_5795 14163 KOG4842 Protein involved in sister chromatid separation and/or segregation + cofit
mRNA_5796 14164 BLAST Protein of unknown function DUF4598 [Xanthophyllomyce... - cofit
mRNA_5797 14165 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + insig.
mRNA_5798 14166 KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein - cofit
mRNA_5799 14167 K09540 SEC63, DNAJC23 translocation protein SEC63 - no data
mRNA_5800 14168 K11801 WDR23 WD repeat-containing protein 23 - insig.
mRNA_5801 14169 HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459 + cofit
mRNA_5802 14170 K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase - cofit

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