Gene info for mRNA_5801 in Rhodosporidium toruloides IFO0880

Name: 14169
Annotation: HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 972,859 to 974,663
See nucleotide sequence around mRNA_5801 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14164 and 14165 are separated by 1613 nucleotides14165 and 14166 are separated by 256 nucleotides14166 and 14167 are separated by 216 nucleotides14167 and 14168 are separated by 334 nucleotides14168 and 14169 are separated by 265 nucleotides14169 and 14170 are separated by 156 nucleotides14170 and 14171 are separated by 326 nucleotides14171 and 14172 are separated by 635 nucleotides14172 and 14173 are separated by 192 nucleotides14173 and 14174 are separated by 751 nucleotides mRNA_5796: 14164 - BLAST Protein of unknown function DUF4598 [Xanthophyllomyce..., at 959,375 to 960,569 14164 mRNA_5797: 14165 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 962,183 to 965,371 14165 mRNA_5798: 14166 - KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein, at 965,628 to 966,973 14166 mRNA_5799: 14167 - K09540 SEC63, DNAJC23 translocation protein SEC63, at 967,190 to 969,688 14167 mRNA_5800: 14168 - K11801 WDR23 WD repeat-containing protein 23, at 970,023 to 972,593 14168 mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972,859 to 974,663 14169 mRNA_5802: 14170 - K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase, at 974,820 to 975,968 14170 mRNA_5803: 14171 - Hypothetical Protein, at 976,295 to 977,367 14171 mRNA_5804: 14172 - Hypothetical Protein, at 978,003 to 978,815 14172 mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979,008 to 980,217 14173 mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980,969 to 985,772 14174
Locus Name Description Strand Phenotype
mRNA_5796 14164 BLAST Protein of unknown function DUF4598 [Xanthophyllomyce... - cofit
mRNA_5797 14165 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + insig.
mRNA_5798 14166 KOG3433 Protein involved in meiotic recombination/predicted coiled-coil protein - cofit
mRNA_5799 14167 K09540 SEC63, DNAJC23 translocation protein SEC63 - no data
mRNA_5800 14168 K11801 WDR23 WD repeat-containing protein 23 - insig.
mRNA_5801 14169 HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459 + cofit
mRNA_5802 14170 K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase - cofit
mRNA_5803 14171 Hypothetical Protein + cofit
mRNA_5804 14172 Hypothetical Protein + cofit
mRNA_5805 14173 HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324 - cofit
mRNA_5806 14174 KOG4197 FOG PPR repeat - cofit

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