Gene info for mRNA_5806 in Rhodosporidium toruloides IFO0880

Name: 14174
Annotation: KOG4197 FOG PPR repeat
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 980,969 to 985,772
See nucleotide sequence around mRNA_5806 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14169 and 14170 are separated by 156 nucleotides14170 and 14171 are separated by 326 nucleotides14171 and 14172 are separated by 635 nucleotides14172 and 14173 are separated by 192 nucleotides14173 and 14174 are separated by 751 nucleotides14174 and 14175 are separated by 555 nucleotides14175 and 14176 are separated by 207 nucleotides14176 and 14177 are separated by 116 nucleotides14177 and 14178 are separated by 250 nucleotides14178 and 14179 are separated by 640 nucleotides mRNA_5801: 14169 - HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459, at 972,859 to 974,663 14169 mRNA_5802: 14170 - K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase, at 974,820 to 975,968 14170 mRNA_5803: 14171 - Hypothetical Protein, at 976,295 to 977,367 14171 mRNA_5804: 14172 - Hypothetical Protein, at 978,003 to 978,815 14172 mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979,008 to 980,217 14173 mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980,969 to 985,772 14174 mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986,328 to 987,350 14175 mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987,558 to 988,212 14176 mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988,329 to 990,216 14177 mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990,467 to 991,553 14178 mRNA_5811: 14179 - K01599 hemE, UROD uroporphyrinogen decarboxylase, at 992,194 to 993,567 14179
Locus Name Description Strand Phenotype
mRNA_5801 14169 HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SMART-helix loop helix domain-SM00353,SUPERFAMILY--SSF47459 + cofit
mRNA_5802 14170 K07441 ALG14 beta-1,4-N-acetylglucosaminyltransferase - cofit
mRNA_5803 14171 Hypothetical Protein + cofit
mRNA_5804 14172 Hypothetical Protein + cofit
mRNA_5805 14173 HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324 - cofit
mRNA_5806 14174 KOG4197 FOG PPR repeat - cofit
mRNA_5807 14175 HMMPfam-Protein of unknown function (DUF2638)-PF10937 + cofit
mRNA_5808 14176 HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695 - cofit
mRNA_5809 14177 KOG2979 Protein involved in DNA repair + cofit
mRNA_5810 14178 K02730 PSMA6 20S proteasome subunit alpha 1 - no data
mRNA_5811 14179 K01599 hemE, UROD uroporphyrinogen decarboxylase + no data

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