Gene info for mRNA_5810 in Rhodosporidium toruloides IFO0880

Name: 14178
Annotation: K02730 PSMA6 20S proteasome subunit alpha 1
Type 1: Protein-coding gene
Located on scaffold scaffold_5, - strand, nucleotides 990,467 to 991,553
See nucleotide sequence around mRNA_5810 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14173 and 14174 are separated by 751 nucleotides14174 and 14175 are separated by 555 nucleotides14175 and 14176 are separated by 207 nucleotides14176 and 14177 are separated by 116 nucleotides14177 and 14178 are separated by 250 nucleotides14178 and 14179 are separated by 640 nucleotides14179 and 14180 are separated by 255 nucleotides14180 and 14181 are separated by 189 nucleotides14181 and 14182 are separated by 168 nucleotides14182 and 14183 are separated by 380 nucleotides mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979,008 to 980,217 14173 mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980,969 to 985,772 14174 mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986,328 to 987,350 14175 mRNA_5808: 14176 - HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695, at 987,558 to 988,212 14176 mRNA_5809: 14177 - KOG2979 Protein involved in DNA repair, at 988,329 to 990,216 14177 mRNA_5810: 14178 - K02730 PSMA6 20S proteasome subunit alpha 1, at 990,467 to 991,553 14178 mRNA_5811: 14179 - K01599 hemE, UROD uroporphyrinogen decarboxylase, at 992,194 to 993,567 14179 mRNA_5812: 14180 - K02831 RAD53 ser/thr/tyr protein kinase RAD53, at 993,823 to 996,800 14180 mRNA_5813: 14181 - K15340 DCLRE1A, SNM1A, PSO2 DNA cross-link repair 1A protein, at 996,990 to 1,000,538 14181 mRNA_5814: 14182 - K06669 SMC3, CSPG6 structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6), at 1,000,707 to 1,005,630 14182 mRNA_5815: 14183 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 1,006,011 to 1,008,191 14183
Locus Name Description Strand Phenotype
mRNA_5805 14173 HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324 - cofit
mRNA_5806 14174 KOG4197 FOG PPR repeat - cofit
mRNA_5807 14175 HMMPfam-Protein of unknown function (DUF2638)-PF10937 + cofit
mRNA_5808 14176 HMMPfam-Cytochrome oxidase complex assembly protein 1-PF08695 - cofit
mRNA_5809 14177 KOG2979 Protein involved in DNA repair + cofit
mRNA_5810 14178 K02730 PSMA6 20S proteasome subunit alpha 1 - no data
mRNA_5811 14179 K01599 hemE, UROD uroporphyrinogen decarboxylase + no data
mRNA_5812 14180 K02831 RAD53 ser/thr/tyr protein kinase RAD53 + cofit
mRNA_5813 14181 K15340 DCLRE1A, SNM1A, PSO2 DNA cross-link repair 1A protein - cofit
mRNA_5814 14182 K06669 SMC3, CSPG6 structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6) + no data
mRNA_5815 14183 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases + cofit

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