Gene info for mRNA_5865 in Rhodosporidium toruloides IFO0880

Name: 14233
Annotation: KOG0800 FOG Predicted E3 ubiquitin ligase
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 1,117,097 to 1,118,879
See nucleotide sequence around mRNA_5865 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14228 and 14229 are separated by 333 nucleotides14229 and 14230 are separated by 1759 nucleotides14230 and 14231 are separated by 210 nucleotides14231 and 14232 are separated by 210 nucleotides14232 and 14233 are separated by 275 nucleotides14233 and 14234 are separated by 284 nucleotides14234 and 14235 are separated by 222 nucleotides14235 and 14236 are separated by 203 nucleotides14236 and 14237 are separated by 341 nucleotides14237 and 14238 are separated by 193 nucleotides mRNA_5860: 14228 - K19770 RNASEK ribonuclease kappa, at 1,104,948 to 1,105,402 14228 mRNA_5861: 14229 - K16261 YAT yeast amino acid transporter, at 1,105,736 to 1,108,814 14229 mRNA_5862: 14230 - K14998 SURF1, SHY1 surfeit locus 1 family protein, at 1,110,574 to 1,111,803 14230 mRNA_5863: 14231 - K09281 K09281 copper-fist transcription factor, at 1,112,014 to 1,113,676 14231 mRNA_5864: 14232 - K01322 PREP prolyl oligopeptidase, at 1,113,887 to 1,116,821 14232 mRNA_5865: 14233 - KOG0800 FOG Predicted E3 ubiquitin ligase, at 1,117,097 to 1,118,879 14233 mRNA_5866: 14234 - KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily), at 1,119,164 to 1,122,161 14234 mRNA_5867: 14235 - K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12, at 1,122,384 to 1,123,037 14235 mRNA_5868: 14236 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 1,123,241 to 1,124,381 14236 mRNA_5869: 14237 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 1,124,723 to 1,126,548 14237 mRNA_5870: 14238 - Hypothetical Protein, at 1,126,742 to 1,127,263 14238
Locus Name Description Strand Phenotype
mRNA_5860 14228 K19770 RNASEK ribonuclease kappa + insig.
mRNA_5861 14229 K16261 YAT yeast amino acid transporter - cofit
mRNA_5862 14230 K14998 SURF1, SHY1 surfeit locus 1 family protein + cofit
mRNA_5863 14231 K09281 K09281 copper-fist transcription factor - cofit
mRNA_5864 14232 K01322 PREP prolyl oligopeptidase + insig.
mRNA_5865 14233 KOG0800 FOG Predicted E3 ubiquitin ligase + cofit
mRNA_5866 14234 KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) - cofit
mRNA_5867 14235 K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12 + no data
mRNA_5868 14236 HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197 + cofit
mRNA_5869 14237 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 - no data
mRNA_5870 14238 Hypothetical Protein + cofit

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