Gene info for mRNA_5868 in Rhodosporidium toruloides IFO0880

Name: 14236
Annotation: HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 1,123,241 to 1,124,381
See nucleotide sequence around mRNA_5868 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14231 and 14232 are separated by 210 nucleotides14232 and 14233 are separated by 275 nucleotides14233 and 14234 are separated by 284 nucleotides14234 and 14235 are separated by 222 nucleotides14235 and 14236 are separated by 203 nucleotides14236 and 14237 are separated by 341 nucleotides14237 and 14238 are separated by 193 nucleotides14238 and 14239 are separated by 580 nucleotides14239 and 14240 are separated by 119 nucleotides14240 and 14241 are separated by 427 nucleotides mRNA_5863: 14231 - K09281 K09281 copper-fist transcription factor, at 1,112,014 to 1,113,676 14231 mRNA_5864: 14232 - K01322 PREP prolyl oligopeptidase, at 1,113,887 to 1,116,821 14232 mRNA_5865: 14233 - KOG0800 FOG Predicted E3 ubiquitin ligase, at 1,117,097 to 1,118,879 14233 mRNA_5866: 14234 - KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily), at 1,119,164 to 1,122,161 14234 mRNA_5867: 14235 - K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12, at 1,122,384 to 1,123,037 14235 mRNA_5868: 14236 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 1,123,241 to 1,124,381 14236 mRNA_5869: 14237 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 1,124,723 to 1,126,548 14237 mRNA_5870: 14238 - Hypothetical Protein, at 1,126,742 to 1,127,263 14238 mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1,127,844 to 1,131,373 14239 mRNA_5872: 14240 - HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233, at 1,131,493 to 1,135,652 14240 mRNA_5873: 14241 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 1,136,080 to 1,137,305 14241
Locus Name Description Strand Phenotype
mRNA_5863 14231 K09281 K09281 copper-fist transcription factor - cofit
mRNA_5864 14232 K01322 PREP prolyl oligopeptidase + insig.
mRNA_5865 14233 KOG0800 FOG Predicted E3 ubiquitin ligase + cofit
mRNA_5866 14234 KOG1454 Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) - cofit
mRNA_5867 14235 K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12 + no data
mRNA_5868 14236 HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197 + cofit
mRNA_5869 14237 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 - no data
mRNA_5870 14238 Hypothetical Protein + cofit
mRNA_5871 14239 HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850 - cofit
mRNA_5872 14240 HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233 + strong
mRNA_5873 14241 K00761 upp, UPRT uracil phosphoribosyltransferase + cofit

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