Gene info for mRNA_5872 in Rhodosporidium toruloides IFO0880

Name: 14240
Annotation: HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 1,131,493 to 1,135,652
See nucleotide sequence around mRNA_5872 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14235 and 14236 are separated by 203 nucleotides14236 and 14237 are separated by 341 nucleotides14237 and 14238 are separated by 193 nucleotides14238 and 14239 are separated by 580 nucleotides14239 and 14240 are separated by 119 nucleotides14240 and 14241 are separated by 427 nucleotides14241 and 14242 are separated by 834 nucleotides14242 and 14243 are separated by 202 nucleotides14243 and 14244 are separated by 1042 nucleotides14244 and 14245 are separated by 345 nucleotides mRNA_5867: 14235 - K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12, at 1,122,384 to 1,123,037 14235 mRNA_5868: 14236 - HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197, at 1,123,241 to 1,124,381 14236 mRNA_5869: 14237 - K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2, at 1,124,723 to 1,126,548 14237 mRNA_5870: 14238 - Hypothetical Protein, at 1,126,742 to 1,127,263 14238 mRNA_5871: 14239 - HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850, at 1,127,844 to 1,131,373 14239 mRNA_5872: 14240 - HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233, at 1,131,493 to 1,135,652 14240 mRNA_5873: 14241 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 1,136,080 to 1,137,305 14241 mRNA_5874: 14242 - K04536 GNB1 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, at 1,138,140 to 1,139,450 14242 mRNA_5875: 14243 - Hypothetical Protein, at 1,139,653 to 1,140,264 14243 mRNA_5876: 14244 - K14537 NUG2, GNL2 nuclear GTP-binding protein, at 1,141,307 to 1,144,033 14244 mRNA_5877: 14245 - K00624 E2.3.1.7 carnitine O-acetyltransferase, at 1,144,379 to 1,146,733 14245
Locus Name Description Strand Phenotype
mRNA_5867 14235 K02950 RP-S12, MRPS12, rpsL small subunit ribosomal protein S12 + no data
mRNA_5868 14236 HMMPfam-2OG-Fe(II) oxygenase superfamily-PF03171,HMMPfam-non-haem dioxygenase in morphine synthesis N-terminal-PF14226,PRINTS-Isopenicillin N synthase signature-PR00682,ProSiteProfiles-Fe(2+) 2-oxoglutarate dioxygenase domain profile.-PS51471,SUPERFAMILY--SSF51197 + cofit
mRNA_5869 14237 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 - no data
mRNA_5870 14238 Hypothetical Protein + cofit
mRNA_5871 14239 HMMPfam-zinc finger of C3HC4-type, RING-PF15227,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SUPERFAMILY--SSF57850 - cofit
mRNA_5872 14240 HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233 + strong
mRNA_5873 14241 K00761 upp, UPRT uracil phosphoribosyltransferase + cofit
mRNA_5874 14242 K04536 GNB1 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 - cofit
mRNA_5875 14243 Hypothetical Protein - cofit
mRNA_5876 14244 K14537 NUG2, GNL2 nuclear GTP-binding protein + no data
mRNA_5877 14245 K00624 E2.3.1.7 carnitine O-acetyltransferase + strong

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