Gene info for mRNA_5894 in Rhodosporidium toruloides IFO0880

Name: 14262
Annotation: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 1,186,921 to 1,189,596
See nucleotide sequence around mRNA_5894 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14257 and 14258 are separated by 344 nucleotides14258 and 14259 are separated by 2247 nucleotides14259 and 14260 are separated by 177 nucleotides14260 and 14261 are separated by 140 nucleotides14261 and 14262 are separated by 406 nucleotides14262 and 14263 are separated by 255 nucleotides14263 and 14264 are separated by 201 nucleotides14264 and 14265 are separated by 104 nucleotides14265 and 14266 are separated by 1115 nucleotides14266 and 14267 are separated by 266 nucleotides mRNA_5889: 14257 - K02977 RP-S27Ae, RPS27A small subunit ribosomal protein S27Ae, at 1,176,475 to 1,177,214 14257 mRNA_5890: 14258 - K01876 DARS, aspS aspartyl-tRNA synthetase, at 1,177,559 to 1,180,094 14258 mRNA_5891: 14259 - K11788 ADE5 phosphoribosylamine--glycine ligase / phosphoribosylformylglycinamidine cyclo-ligase, at 1,182,342 to 1,185,171 14259 mRNA_5892: 14260 - Hypothetical Protein, at 1,185,349 to 1,185,740 14260 mRNA_5893: 14261 - KOG1748 Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit, at 1,185,881 to 1,186,514 14261 mRNA_5894: 14262 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1,186,921 to 1,189,596 14262 mRNA_5895: 14263 - K17255 GDI1_2 Rab GDP dissociation inhibitor, at 1,189,852 to 1,191,772 14263 mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1,191,974 to 1,192,832 14264 mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1,192,937 to 1,193,713 14265 mRNA_5898: 14266 - Hypothetical Protein, at 1,194,829 to 1,196,243 14266 mRNA_5899: 14267 - K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase, at 1,196,510 to 1,197,611 14267
Locus Name Description Strand Phenotype
mRNA_5889 14257 K02977 RP-S27Ae, RPS27A small subunit ribosomal protein S27Ae + cofit
mRNA_5890 14258 K01876 DARS, aspS aspartyl-tRNA synthetase - no data
mRNA_5891 14259 K11788 ADE5 phosphoribosylamine--glycine ligase / phosphoribosylformylglycinamidine cyclo-ligase + strong
mRNA_5892 14260 Hypothetical Protein - cofit
mRNA_5893 14261 KOG1748 Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit + no data
mRNA_5894 14262 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 + insig.
mRNA_5895 14263 K17255 GDI1_2 Rab GDP dissociation inhibitor - no data
mRNA_5896 14264 K07573 CSL4, EXOSC1 exosome complex component CSL4 - cofit
mRNA_5897 14265 Interpro Mitochondrial import receptor subunit or translocase + insig.
mRNA_5898 14266 Hypothetical Protein + cofit
mRNA_5899 14267 K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase + cofit

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