Gene info for mRNA_5899 in Rhodosporidium toruloides IFO0880

Name: 14267
Annotation: K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 1,196,510 to 1,197,611
See nucleotide sequence around mRNA_5899 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14262 and 14263 are separated by 255 nucleotides14263 and 14264 are separated by 201 nucleotides14264 and 14265 are separated by 104 nucleotides14265 and 14266 are separated by 1115 nucleotides14266 and 14267 are separated by 266 nucleotides14267 and 14268 are separated by 2785 nucleotides14268 and 14269 are separated by 168 nucleotides14269 and 14270 are separated by 417 nucleotides14270 and 14271 are separated by 568 nucleotides14271 and 14272 are separated by 234 nucleotides mRNA_5894: 14262 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1,186,921 to 1,189,596 14262 mRNA_5895: 14263 - K17255 GDI1_2 Rab GDP dissociation inhibitor, at 1,189,852 to 1,191,772 14263 mRNA_5896: 14264 - K07573 CSL4, EXOSC1 exosome complex component CSL4, at 1,191,974 to 1,192,832 14264 mRNA_5897: 14265 - Interpro Mitochondrial import receptor subunit or translocase, at 1,192,937 to 1,193,713 14265 mRNA_5898: 14266 - Hypothetical Protein, at 1,194,829 to 1,196,243 14266 mRNA_5899: 14267 - K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase, at 1,196,510 to 1,197,611 14267 mRNA_5900: 14268 - KOG4778 Mitochondrial ribosomal protein L28, at 1,200,397 to 1,201,096 14268 mRNA_5901: 14269 - K07204 RAPTOR regulatory associated protein of mTOR, at 1,201,265 to 1,206,244 14269 mRNA_5902: 14270 - K08336 ATG12 ubiquitin-like protein ATG12, at 1,206,662 to 1,207,258 14270 mRNA_5903: 14271 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 1,207,827 to 1,210,876 14271 mRNA_5904: 14272 - KOG4234 TPR repeat-containing protein, at 1,211,111 to 1,212,389 14272
Locus Name Description Strand Phenotype
mRNA_5894 14262 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 + insig.
mRNA_5895 14263 K17255 GDI1_2 Rab GDP dissociation inhibitor - no data
mRNA_5896 14264 K07573 CSL4, EXOSC1 exosome complex component CSL4 - cofit
mRNA_5897 14265 Interpro Mitochondrial import receptor subunit or translocase + insig.
mRNA_5898 14266 Hypothetical Protein + cofit
mRNA_5899 14267 K00038 E1.1.1.53 3alpha(or 20beta)-hydroxysteroid dehydrogenase + cofit
mRNA_5900 14268 KOG4778 Mitochondrial ribosomal protein L28 + no data
mRNA_5901 14269 K07204 RAPTOR regulatory associated protein of mTOR - no data
mRNA_5902 14270 K08336 ATG12 ubiquitin-like protein ATG12 + cofit
mRNA_5903 14271 SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126 - cofit
mRNA_5904 14272 KOG4234 TPR repeat-containing protein + cofit

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