Gene info for mRNA_6085 in Rhodosporidium toruloides IFO0880

Name: 14453
Annotation: HMMPfam-Heparinase II/III-like protein-PF07940,SUPERFAMILY--SSF48230
Type 1: Protein-coding gene
Located on scaffold scaffold_5, + strand, nucleotides 1,611,755 to 1,615,148
See nucleotide sequence around mRNA_6085 or for all of scaffold scaffold_5

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14448 and 14449 are separated by 86 nucleotides14449 and 14450 are separated by 764 nucleotides14450 and 14451 are separated by 194 nucleotides14451 and 14452 are separated by 164 nucleotides14452 and 14453 are separated by 677 nucleotides14453 and 14454 are separated by 687 nucleotides14454 and 14455 are separated by 277 nucleotides14455 and 14456 are separated by 461 nucleotides14456 and 14457 are separated by 440 nucleotides14457 and 14458 are separated by 617 nucleotides mRNA_6080: 14448 - KOG4379 Uncharacterized conserved protein (tumor antigen CML66 in humans), at 1,596,741 to 1,598,901 14448 mRNA_6081: 14449 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,598,988 to 1,602,551 14449 mRNA_6082: 14450 - K03010 RPB2, POLR2B DNA-directed RNA polymerase II subunit RPB2, at 1,603,316 to 1,607,774 14450 mRNA_6083: 14451 - Hypothetical Protein, at 1,607,969 to 1,610,179 14451 mRNA_6084: 14452 - SUPERFAMILY--SSF54427, at 1,610,344 to 1,611,077 14452 mRNA_6085: 14453 - HMMPfam-Heparinase II/III-like protein-PF07940,SUPERFAMILY--SSF48230, at 1,611,755 to 1,615,148 14453 mRNA_6086: 14454 - HMMPfam-Cutinase-PF01083,SUPERFAMILY--SSF53474, at 1,615,836 to 1,616,999 14454 mRNA_6087: 14455 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 1,617,277 to 1,619,252 14455 mRNA_6088: 14456 - KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes, at 1,619,714 to 1,621,699 14456 mRNA_6089: 14457 - KOG3098 Uncharacterized conserved protein, at 1,622,140 to 1,623,844 14457 mRNA_6090: 14458 - KOG0143 Iron/ascorbate family oxidoreductases, at 1,624,462 to 1,625,947 14458
Locus Name Description Strand Phenotype
mRNA_6080 14448 KOG4379 Uncharacterized conserved protein (tumor antigen CML66 in humans) + no data
mRNA_6081 14449 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - insig.
mRNA_6082 14450 K03010 RPB2, POLR2B DNA-directed RNA polymerase II subunit RPB2 + no data
mRNA_6083 14451 Hypothetical Protein + cofit
mRNA_6084 14452 SUPERFAMILY--SSF54427 + insig.
mRNA_6085 14453 HMMPfam-Heparinase II/III-like protein-PF07940,SUPERFAMILY--SSF48230 + no data
mRNA_6086 14454 HMMPfam-Cutinase-PF01083,SUPERFAMILY--SSF53474 + insig.
mRNA_6087 14455 KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes - insig.
mRNA_6088 14456 KOG1294 Apurinic/apyrimidinic endonuclease and related enzymes - cofit
mRNA_6089 14457 KOG3098 Uncharacterized conserved protein - cofit
mRNA_6090 14458 KOG0143 Iron/ascorbate family oxidoreductases + cofit

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