Gene info for mRNA_6179 in Rhodosporidium toruloides IFO0880

Name: 14547
Annotation: KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s)
Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 187,281 to 188,756
See nucleotide sequence around mRNA_6179 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14542 and 14543 are separated by 261 nucleotides14543 and 14544 are separated by 1415 nucleotides14544 and 14545 are separated by 379 nucleotides14545 and 14546 are separated by 993 nucleotides14546 and 14547 are separated by 378 nucleotides14547 and 14548 are separated by 112 nucleotides14548 and 14549 are separated by 456 nucleotides14549 and 14550 are separated by 796 nucleotides14550 and 14551 are separated by 658 nucleotides14551 and 14552 are separated by 821 nucleotides mRNA_6174: 14542 - BLAST Glycoside hydrolase [Aureobasidium pullulans], at 176,764 to 178,095 14542 mRNA_6175: 14543 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 178,357 to 180,910 14543 mRNA_6176: 14544 - K03000 RPA12, ZNRD1 DNA-directed RNA polymerase I subunit RPA12, at 182,326 to 182,954 14544 mRNA_6177: 14545 - K00868 pdxK, pdxY pyridoxine kinase, at 183,334 to 184,793 14545 mRNA_6178: 14546 - K17623 HDHD1 pseudouridine 5'-phosphatase, at 185,787 to 186,902 14546 mRNA_6179: 14547 - KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s), at 187,281 to 188,756 14547 mRNA_6180: 14548 - KOG0218 Mismatch repair MSH3, at 188,869 to 192,529 14548 mRNA_6181: 14549 - K13126 PABPC polyadenylate-binding protein, at 192,986 to 195,356 14549 mRNA_6182: 14550 - K06665 SSN6 glucose repression mediator protein, at 196,153 to 199,901 14550 mRNA_6183: 14551 - Hypothetical Protein, at 200,560 to 201,520 14551 mRNA_6184: 14552 - Hypothetical Protein, at 202,342 to 203,677 14552
Locus Name Description Strand Phenotype
mRNA_6174 14542 BLAST Glycoside hydrolase [Aureobasidium pullulans] + cofit
mRNA_6175 14543 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) - cofit
mRNA_6176 14544 K03000 RPA12, ZNRD1 DNA-directed RNA polymerase I subunit RPA12 + no data
mRNA_6177 14545 K00868 pdxK, pdxY pyridoxine kinase + cofit
mRNA_6178 14546 K17623 HDHD1 pseudouridine 5'-phosphatase - insig.
mRNA_6179 14547 KOG2101 Intermediate filament-like protein, sorting nexins, and related proteins containing PX (PhoX) domain(s) + cofit
mRNA_6180 14548 KOG0218 Mismatch repair MSH3 - cofit
mRNA_6181 14549 K13126 PABPC polyadenylate-binding protein - no data
mRNA_6182 14550 K06665 SSN6 glucose repression mediator protein - strong
mRNA_6183 14551 Hypothetical Protein + cofit
mRNA_6184 14552 Hypothetical Protein - cofit

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