Gene info for mRNA_6261 in Rhodosporidium toruloides IFO0880

Name: 14629
Annotation: K09274 K09274 HMG box factor, other
Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 383,014 to 384,624
See nucleotide sequence around mRNA_6261 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14624 and 14625 are separated by 257 nucleotides14625 and 14626 are separated by 842 nucleotides14626 and 14627 are separated by 517 nucleotides14627 and 14628 are separated by 463 nucleotides14628 and 14629 are separated by 1234 nucleotides14629 and 14630 are separated by 464 nucleotides14630 and 14631 are separated by 1439 nucleotides14631 and 14632 are separated by 89 nucleotides14632 and 14633 are separated by 371 nucleotides14633 and 14634 are separated by 1543 nucleotides mRNA_6256: 14624 - Hypothetical Protein, at 367,934 to 368,444 14624 mRNA_6257: 14625 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 368,702 to 371,060 14625 mRNA_6258: 14626 - K01687 ilvD dihydroxy-acid dehydratase, at 371,903 to 374,480 14626 mRNA_6259: 14627 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 374,998 to 377,098 14627 mRNA_6260: 14628 - HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631, at 377,562 to 381,779 14628 mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383,014 to 384,624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385,089 to 388,417 14630 mRNA_6263: 14631 - Hypothetical Protein, at 389,857 to 392,694 14631 mRNA_6264: 14632 - KOG1550 Extracellular protein SEL-1 and related proteins, at 392,784 to 393,598 14632 mRNA_6265: 14633 - K07897 RAB7A Ras-related protein Rab-7A, at 393,970 to 395,012 14633 mRNA_6266: 14634 - Hypothetical Protein, at 396,556 to 399,256 14634
Locus Name Description Strand Phenotype
mRNA_6256 14624 Hypothetical Protein + cofit
mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 + cofit
mRNA_6258 14626 K01687 ilvD dihydroxy-acid dehydratase - insig.
mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 + cofit
mRNA_6260 14628 HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631 - cofit
mRNA_6261 14629 K09274 K09274 HMG box factor, other + cofit
mRNA_6262 14630 SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753 - cofit
mRNA_6263 14631 Hypothetical Protein + cofit
mRNA_6264 14632 KOG1550 Extracellular protein SEL-1 and related proteins + insig.
mRNA_6265 14633 K07897 RAB7A Ras-related protein Rab-7A - no data
mRNA_6266 14634 Hypothetical Protein - no data

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