Gene info for mRNA_6278 in Rhodosporidium toruloides IFO0880

Name: 14646
Annotation: K17080 PHB1 prohibitin 1
Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 426,858 to 428,286
See nucleotide sequence around mRNA_6278 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14641 and 14642 are separated by 1581 nucleotides14642 and 14643 are separated by 360 nucleotides14643 and 14644 are separated by 793 nucleotides14644 and 14645 are separated by 128 nucleotides14645 and 14646 are separated by 140 nucleotides14646 and 14647 are separated by 200 nucleotides14647 and 14648 are separated by 398 nucleotides14648 and 14649 are separated by 301 nucleotides14649 and 14650 are separated by 289 nucleotides14650 and 14651 are separated by 330 nucleotides mRNA_6273: 14641 - HMMPfam-Chitin synthase III catalytic subunit-PF12271, at 415,136 to 416,506 14641 mRNA_6274: 14642 - Hypothetical Protein, at 418,088 to 419,666 14642 mRNA_6275: 14643 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 420,027 to 422,108 14643 mRNA_6276: 14644 - K12615 EDC3 enhancer of mRNA-decapping protein 3, at 422,902 to 424,921 14644 mRNA_6277: 14645 - KOG2812 Uncharacterized conserved protein, at 425,050 to 426,717 14645 mRNA_6278: 14646 - K17080 PHB1 prohibitin 1, at 426,858 to 428,286 14646 mRNA_6279: 14647 - K13110 MFAP1 microfibrillar-associated protein 1, at 428,487 to 430,631 14647 mRNA_6280: 14648 - K14050 RABGGTA geranylgeranyl transferase type-2 subunit alpha, at 431,030 to 432,502 14648 mRNA_6281: 14649 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 432,804 to 433,205 14649 mRNA_6282: 14650 - HMMPfam-SET domain-PF00856,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-SET domain profile.-PS50280,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SMART-SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain-SM00317,SUPERFAMILY--SSF48452,SUPERFAMILY--SSF82199, at 433,495 to 438,419 14650 mRNA_6283: 14651 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 438,750 to 440,581 14651
Locus Name Description Strand Phenotype
mRNA_6273 14641 HMMPfam-Chitin synthase III catalytic subunit-PF12271 - no data
mRNA_6274 14642 Hypothetical Protein + cofit
mRNA_6275 14643 BLAST secreted protein [Melampsora larici-populina 98AG31] - cofit
mRNA_6276 14644 K12615 EDC3 enhancer of mRNA-decapping protein 3 + cofit
mRNA_6277 14645 KOG2812 Uncharacterized conserved protein - no data
mRNA_6278 14646 K17080 PHB1 prohibitin 1 + insig.
mRNA_6279 14647 K13110 MFAP1 microfibrillar-associated protein 1 - no data
mRNA_6280 14648 K14050 RABGGTA geranylgeranyl transferase type-2 subunit alpha - no data
mRNA_6281 14649 HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909 + cofit
mRNA_6282 14650 HMMPfam-SET domain-PF00856,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-SET domain profile.-PS50280,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SMART-SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain-SM00317,SUPERFAMILY--SSF48452,SUPERFAMILY--SSF82199 - cofit
mRNA_6283 14651 HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879 - insig.

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