Gene info for mRNA_6285 in Rhodosporidium toruloides IFO0880

Name: 14653
Annotation: K05610 UCHL5, UCH37 ubiquitin carboxyl-terminal hydrolase L5
Type 1: Protein-coding gene
Located on scaffold scaffold_6, - strand, nucleotides 442,614 to 443,927
See nucleotide sequence around mRNA_6285 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14648 and 14649 are separated by 301 nucleotides14649 and 14650 are separated by 289 nucleotides14650 and 14651 are separated by 330 nucleotides14651 and 14652 are separated by 141 nucleotides14652 and 14653 are separated by 185 nucleotides14653 and 14654 are separated by 286 nucleotides14654 and 14655 are separated by 483 nucleotides14655 and 14656 are separated by 290 nucleotides14656 and 14657 are separated by 479 nucleotides14657 and 14658 are separated by 339 nucleotides mRNA_6280: 14648 - K14050 RABGGTA geranylgeranyl transferase type-2 subunit alpha, at 431,030 to 432,502 14648 mRNA_6281: 14649 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 432,804 to 433,205 14649 mRNA_6282: 14650 - HMMPfam-SET domain-PF00856,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-SET domain profile.-PS50280,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SMART-SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain-SM00317,SUPERFAMILY--SSF48452,SUPERFAMILY--SSF82199, at 433,495 to 438,419 14650 mRNA_6283: 14651 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 438,750 to 440,581 14651 mRNA_6284: 14652 - BLAST macrofage activating glycoprotein, putative [Rhizocto..., at 440,723 to 442,428 14652 mRNA_6285: 14653 - K05610 UCHL5, UCH37 ubiquitin carboxyl-terminal hydrolase L5, at 442,614 to 443,927 14653 mRNA_6286: 14654 - HMMPfam-Protein of unknown function (DUF3128)-PF11326, at 444,214 to 444,568 14654 mRNA_6287: 14655 - K01262 pepP Xaa-Pro aminopeptidase, at 445,052 to 447,744 14655 mRNA_6288: 14656 - KOG0876 Manganese superoxide dismutase, at 448,035 to 449,039 14656 mRNA_6289: 14657 - Hypothetical Protein, at 449,519 to 450,929 14657 mRNA_6290: 14658 - KOG0394 Ras-related GTPase, at 451,269 to 452,760 14658
Locus Name Description Strand Phenotype
mRNA_6280 14648 K14050 RABGGTA geranylgeranyl transferase type-2 subunit alpha - no data
mRNA_6281 14649 HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909 + cofit
mRNA_6282 14650 HMMPfam-SET domain-PF00856,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-SET domain profile.-PS50280,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SMART-SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain-SM00317,SUPERFAMILY--SSF48452,SUPERFAMILY--SSF82199 - cofit
mRNA_6283 14651 HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879 - insig.
mRNA_6284 14652 BLAST macrofage activating glycoprotein, putative [Rhizocto... + cofit
mRNA_6285 14653 K05610 UCHL5, UCH37 ubiquitin carboxyl-terminal hydrolase L5 - cofit
mRNA_6286 14654 HMMPfam-Protein of unknown function (DUF3128)-PF11326 + no data
mRNA_6287 14655 K01262 pepP Xaa-Pro aminopeptidase + insig.
mRNA_6288 14656 KOG0876 Manganese superoxide dismutase - cofit
mRNA_6289 14657 Hypothetical Protein - cofit
mRNA_6290 14658 KOG0394 Ras-related GTPase - cofit

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