Gene info for mRNA_6484 in Rhodosporidium toruloides IFO0880

Name: 14852
Annotation: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701
Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 895,404 to 896,559
See nucleotide sequence around mRNA_6484 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14847 and 14848 are separated by 505 nucleotides14848 and 14849 are separated by 320 nucleotides14849 and 14850 are separated by 192 nucleotides14850 and 14851 are separated by 656 nucleotides14851 and 14852 overlap by 11 nucleotides14852 and 14853 are separated by 1881 nucleotides14853 and 14854 are separated by 499 nucleotides14854 and 14855 are separated by 775 nucleotides14855 and 14856 are separated by 355 nucleotides14856 and 14857 are separated by 394 nucleotides mRNA_6479: 14847 - K07378 NLGN neuroligin, at 888,957 to 890,595 14847 mRNA_6480: 14848 - Hypothetical Protein, at 891,101 to 891,716 14848 mRNA_6481: 14849 - K02201 E2.7.7.3B pantetheine-phosphate adenylyltransferase, at 892,037 to 893,331 14849 mRNA_6482: 14850 - Hypothetical Protein, at 893,524 to 894,299 14850 mRNA_6483: 14851 - Hypothetical Protein, at 894,956 to 895,414 14851 mRNA_6484: 14852 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 895,404 to 896,559 14852 mRNA_6485: 14853 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 898,441 to 899,753 14853 mRNA_6486: 14854 - K08294 MKK1_2 mitogen-activated protein kinase kinase, at 900,253 to 901,810 14854 mRNA_6487: 14855 - K11237 BEM1 bud emergence protein 1, at 902,586 to 904,816 14855 mRNA_6488: 14856 - K01655 LYS21, LYS20 homocitrate synthase, at 905,172 to 907,549 14856 mRNA_6489: 14857 - KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases, at 907,944 to 911,303 14857
Locus Name Description Strand Phenotype
mRNA_6479 14847 K07378 NLGN neuroligin - cofit
mRNA_6480 14848 Hypothetical Protein + no data
mRNA_6481 14849 K02201 E2.7.7.3B pantetheine-phosphate adenylyltransferase + no data
mRNA_6482 14850 Hypothetical Protein + cofit
mRNA_6483 14851 Hypothetical Protein - cofit
mRNA_6484 14852 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_6485 14853 K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase + cofit
mRNA_6486 14854 K08294 MKK1_2 mitogen-activated protein kinase kinase + cofit
mRNA_6487 14855 K11237 BEM1 bud emergence protein 1 + cofit
mRNA_6488 14856 K01655 LYS21, LYS20 homocitrate synthase + cofit
mRNA_6489 14857 KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases - cofit

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