Gene info for mRNA_6488 in Rhodosporidium toruloides IFO0880

Name: 14856
Annotation: K01655 LYS21, LYS20 homocitrate synthase
Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 905,172 to 907,549
See nucleotide sequence around mRNA_6488 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14851 and 14852 overlap by 11 nucleotides14852 and 14853 are separated by 1881 nucleotides14853 and 14854 are separated by 499 nucleotides14854 and 14855 are separated by 775 nucleotides14855 and 14856 are separated by 355 nucleotides14856 and 14857 are separated by 394 nucleotides14857 and 14858 are separated by 359 nucleotides14858 and 14859 are separated by 291 nucleotides14859 and 14860 are separated by 621 nucleotides14860 and 14861 are separated by 156 nucleotides mRNA_6483: 14851 - Hypothetical Protein, at 894,956 to 895,414 14851 mRNA_6484: 14852 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 895,404 to 896,559 14852 mRNA_6485: 14853 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 898,441 to 899,753 14853 mRNA_6486: 14854 - K08294 MKK1_2 mitogen-activated protein kinase kinase, at 900,253 to 901,810 14854 mRNA_6487: 14855 - K11237 BEM1 bud emergence protein 1, at 902,586 to 904,816 14855 mRNA_6488: 14856 - K01655 LYS21, LYS20 homocitrate synthase, at 905,172 to 907,549 14856 mRNA_6489: 14857 - KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases, at 907,944 to 911,303 14857 mRNA_6490: 14858 - KOG1698 Mitochondrial/chloroplast ribosomal protein L19, at 911,663 to 912,456 14858 mRNA_6491: 14859 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 912,748 to 918,213 14859 mRNA_6492: 14860 - KOG3269 Predicted membrane protein, at 918,835 to 919,868 14860 mRNA_6493: 14861 - K20301 TRAPPC2, TRS20 trafficking protein particle complex subunit 2, at 920,025 to 920,861 14861
Locus Name Description Strand Phenotype
mRNA_6483 14851 Hypothetical Protein - cofit
mRNA_6484 14852 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 + cofit
mRNA_6485 14853 K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase + cofit
mRNA_6486 14854 K08294 MKK1_2 mitogen-activated protein kinase kinase + cofit
mRNA_6487 14855 K11237 BEM1 bud emergence protein 1 + cofit
mRNA_6488 14856 K01655 LYS21, LYS20 homocitrate synthase + cofit
mRNA_6489 14857 KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases - cofit
mRNA_6490 14858 KOG1698 Mitochondrial/chloroplast ribosomal protein L19 + no data
mRNA_6491 14859 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins - insig.
mRNA_6492 14860 KOG3269 Predicted membrane protein - cofit
mRNA_6493 14861 K20301 TRAPPC2, TRS20 trafficking protein particle complex subunit 2 - no data

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