Gene info for mRNA_6552 in Rhodosporidium toruloides IFO0880

Name: 14920
Annotation: K03127 TAF13 transcription initiation factor TFIID subunit 13
Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 1,075,632 to 1,076,180
See nucleotide sequence around mRNA_6552 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14915 and 14916 are separated by 800 nucleotides14916 and 14917 are separated by 994 nucleotides14917 and 14918 are separated by 69 nucleotides14918 and 14919 are separated by 4372 nucleotides14919 and 14920 are separated by 440 nucleotides14920 and 14921 are separated by 1560 nucleotides14921 and 14922 are separated by 966 nucleotides14922 and 14923 are separated by 880 nucleotides14923 and 14924 are separated by 64 nucleotides14924 and 14925 are separated by 250 nucleotides mRNA_6547: 14915 - KOG3040 Predicted sugar phosphatase (HAD superfamily), at 1,053,521 to 1,054,436 14915 mRNA_6548: 14916 - K11592 DICER1, DCR1 endoribonuclease Dicer, at 1,055,237 to 1,061,964 14916 mRNA_6549: 14917 - KOG0605 NDR and related serine/threonine kinases, at 1,062,959 to 1,066,157 14917 mRNA_6550: 14918 - K11374 ELP2 elongator complex protein 2, at 1,066,227 to 1,069,568 14918 mRNA_6551: 14919 - ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756, at 1,073,941 to 1,075,191 14919 mRNA_6552: 14920 - K03127 TAF13 transcription initiation factor TFIID subunit 13, at 1,075,632 to 1,076,180 14920 mRNA_6553: 14921 - SUPERFAMILY--SSF52266, at 1,077,741 to 1,079,727 14921 mRNA_6554: 14922 - K15258 PARP6_8 poly [ADP-ribose] polymerase 6/8, at 1,080,694 to 1,084,243 14922 mRNA_6555: 14923 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 1,085,124 to 1,086,396 14923 mRNA_6556: 14924 - K14793 RRP9 ribosomal RNA-processing protein 9, at 1,086,461 to 1,088,538 14924 mRNA_6557: 14925 - K13566 NIT2 omega-amidase, at 1,088,789 to 1,090,275 14925
Locus Name Description Strand Phenotype
mRNA_6547 14915 KOG3040 Predicted sugar phosphatase (HAD superfamily) - no data
mRNA_6548 14916 K11592 DICER1, DCR1 endoribonuclease Dicer + insig.
mRNA_6549 14917 KOG0605 NDR and related serine/threonine kinases + insig.
mRNA_6550 14918 K11374 ELP2 elongator complex protein 2 - strong
mRNA_6551 14919 ProSiteProfiles-Zinc finger CCHC-type profile.-PS50158,SMART-zinc finger-SM00343,SUPERFAMILY--SSF57756 - cofit
mRNA_6552 14920 K03127 TAF13 transcription initiation factor TFIID subunit 13 + cofit
mRNA_6553 14921 SUPERFAMILY--SSF52266 - strong
mRNA_6554 14922 K15258 PARP6_8 poly [ADP-ribose] polymerase 6/8 - cofit
mRNA_6555 14923 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047 + cofit
mRNA_6556 14924 K14793 RRP9 ribosomal RNA-processing protein 9 - no data
mRNA_6557 14925 K13566 NIT2 omega-amidase - insig.

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