Gene info for mRNA_6573 in Rhodosporidium toruloides IFO0880

Name: 14941
Annotation: K20472 COPZ, RET3 coatomer subunit zeta
Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 1,136,818 to 1,137,633
See nucleotide sequence around mRNA_6573 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14936 and 14937 are separated by 1404 nucleotides14937 and 14938 are separated by 350 nucleotides14938 and 14939 are separated by 970 nucleotides14939 and 14940 are separated by 337 nucleotides14940 and 14941 are separated by 275 nucleotides14941 and 14942 are separated by 320 nucleotides14942 and 14943 are separated by 483 nucleotides14943 and 14944 are separated by 453 nucleotides14944 and 14945 are separated by 359 nucleotides14945 and 14946 are separated by 394 nucleotides mRNA_6568: 14936 - BLAST Protein IWS1 homolog A [Rhizoctonia solani], at 1,116,813 to 1,120,702 14936 mRNA_6569: 14937 - K02978 RP-S27e, RPS27 small subunit ribosomal protein S27e, at 1,122,107 to 1,122,716 14937 mRNA_6570: 14938 - K09184 GATAF GATA-binding protein, other eukaryote, at 1,123,067 to 1,127,630 14938 mRNA_6571: 14939 - K11790 DTL, CDT2, DCAF2 denticleless, at 1,128,601 to 1,130,974 14939 mRNA_6572: 14940 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928, at 1,131,312 to 1,136,542 14940 mRNA_6573: 14941 - K20472 COPZ, RET3 coatomer subunit zeta, at 1,136,818 to 1,137,633 14941 mRNA_6574: 14942 - K18258 CRYM thiomorpholine-carboxylate dehydrogenase, at 1,137,954 to 1,139,326 14942 mRNA_6575: 14943 - KOG0440 Cell cycle-associated protein Mob1-1, at 1,139,810 to 1,140,979 14943 mRNA_6576: 14944 - K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3, at 1,141,433 to 1,143,037 14944 mRNA_6577: 14945 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160, at 1,143,397 to 1,147,463 14945 mRNA_6578: 14946 - HMMPfam-pfkB family carbohydrate kinase-PF00294,SUPERFAMILY--SSF53613, at 1,147,858 to 1,149,094 14946
Locus Name Description Strand Phenotype
mRNA_6568 14936 BLAST Protein IWS1 homolog A [Rhizoctonia solani] + cofit
mRNA_6569 14937 K02978 RP-S27e, RPS27 small subunit ribosomal protein S27e + no data
mRNA_6570 14938 K09184 GATAF GATA-binding protein, other eukaryote - cofit
mRNA_6571 14939 K11790 DTL, CDT2, DCAF2 denticleless - cofit
mRNA_6572 14940 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928 - insig.
mRNA_6573 14941 K20472 COPZ, RET3 coatomer subunit zeta + no data
mRNA_6574 14942 K18258 CRYM thiomorpholine-carboxylate dehydrogenase - cofit
mRNA_6575 14943 KOG0440 Cell cycle-associated protein Mob1-1 + no data
mRNA_6576 14944 K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3 + cofit
mRNA_6577 14945 ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160 + cofit
mRNA_6578 14946 HMMPfam-pfkB family carbohydrate kinase-PF00294,SUPERFAMILY--SSF53613 + insig.

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