Gene info for mRNA_6576 in Rhodosporidium toruloides IFO0880

Name: 14944
Annotation: K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3
Type 1: Protein-coding gene
Located on scaffold scaffold_6, + strand, nucleotides 1,141,433 to 1,143,037
See nucleotide sequence around mRNA_6576 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 14939 and 14940 are separated by 337 nucleotides14940 and 14941 are separated by 275 nucleotides14941 and 14942 are separated by 320 nucleotides14942 and 14943 are separated by 483 nucleotides14943 and 14944 are separated by 453 nucleotides14944 and 14945 are separated by 359 nucleotides14945 and 14946 are separated by 394 nucleotides14946 and 14947 are separated by 60 nucleotides14947 and 14948 are separated by 134 nucleotides14948 and 14949 are separated by 392 nucleotides mRNA_6571: 14939 - K11790 DTL, CDT2, DCAF2 denticleless, at 1,128,601 to 1,130,974 14939 mRNA_6572: 14940 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928, at 1,131,312 to 1,136,542 14940 mRNA_6573: 14941 - K20472 COPZ, RET3 coatomer subunit zeta, at 1,136,818 to 1,137,633 14941 mRNA_6574: 14942 - K18258 CRYM thiomorpholine-carboxylate dehydrogenase, at 1,137,954 to 1,139,326 14942 mRNA_6575: 14943 - KOG0440 Cell cycle-associated protein Mob1-1, at 1,139,810 to 1,140,979 14943 mRNA_6576: 14944 - K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3, at 1,141,433 to 1,143,037 14944 mRNA_6577: 14945 - ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160, at 1,143,397 to 1,147,463 14945 mRNA_6578: 14946 - HMMPfam-pfkB family carbohydrate kinase-PF00294,SUPERFAMILY--SSF53613, at 1,147,858 to 1,149,094 14946 mRNA_6579: 14947 - KOG0871 Class 2 transcription repressor NC2, beta subunit (Dr1), at 1,149,155 to 1,149,894 14947 mRNA_6580: 14948 - K11098 SNRPF, SMF small nuclear ribonucleoprotein F, at 1,150,029 to 1,150,564 14948 mRNA_6581: 14949 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 1,150,957 to 1,153,150 14949
Locus Name Description Strand Phenotype
mRNA_6571 14939 K11790 DTL, CDT2, DCAF2 denticleless - cofit
mRNA_6572 14940 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-Nuclear transport factor 2 (NTF2) domain-PF02136,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Nuclear transport factor 2 domain profile.-PS50177,SMART-WD40 repeats-SM00320,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF50998,SUPERFAMILY--SSF54427,SUPERFAMILY--SSF54928 - insig.
mRNA_6573 14941 K20472 COPZ, RET3 coatomer subunit zeta + no data
mRNA_6574 14942 K18258 CRYM thiomorpholine-carboxylate dehydrogenase - cofit
mRNA_6575 14943 KOG0440 Cell cycle-associated protein Mob1-1 + no data
mRNA_6576 14944 K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3 + cofit
mRNA_6577 14945 ProSiteProfiles-Chromo and chromo shadow domain profile.-PS50013,SUPERFAMILY--SSF54160 + cofit
mRNA_6578 14946 HMMPfam-pfkB family carbohydrate kinase-PF00294,SUPERFAMILY--SSF53613 + insig.
mRNA_6579 14947 KOG0871 Class 2 transcription repressor NC2, beta subunit (Dr1) - no data
mRNA_6580 14948 K11098 SNRPF, SMF small nuclear ribonucleoprotein F + no data
mRNA_6581 14949 HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473 + cofit

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