Gene info for mRNA_6659 in Rhodosporidium toruloides IFO0880

Name: 15027
Annotation: K05663 ABC.ATM mitochondrial ABC transporter ATM
Type 1: Protein-coding gene
Located on scaffold scaffold_6, - strand, nucleotides 1,370,693 to 1,373,174
See nucleotide sequence around mRNA_6659 or for all of scaffold scaffold_6

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15022 and 15023 are separated by 1383 nucleotides15023 and 15024 are separated by 362 nucleotides15024 and 15025 are separated by 1056 nucleotides15025 and 15026 are separated by 160 nucleotides15026 and 15027 are separated by 285 nucleotides15027 and 15028 are separated by 691 nucleotides15028 and 15029 are separated by 69 nucleotides15029 and 15030 are separated by 1441 nucleotides15030 and 15031 are separated by 456 nucleotides15031 and 15032 are separated by 186 nucleotides mRNA_6654: 15022 - K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor, at 1,356,168 to 1,357,307 15022 mRNA_6655: 15023 - Interpro Domain of unknown function (DUF1772), at 1,358,691 to 1,359,757 15023 mRNA_6656: 15024 - KOG1674 Cyclin, at 1,360,120 to 1,362,447 15024 mRNA_6657: 15025 - K16302 CNNM metal transporter CNNM, at 1,363,504 to 1,366,738 15025 mRNA_6658: 15026 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-4Fe-4S ferredoxin-type iron-sulfur binding domain profile.-PS51379,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1,366,899 to 1,370,407 15026 mRNA_6659: 15027 - K05663 ABC.ATM mitochondrial ABC transporter ATM, at 1,370,693 to 1,373,174 15027 mRNA_6660: 15028 - KOG1342 Histone deacetylase complex, catalytic component RPD3, at 1,373,866 to 1,375,485 15028 mRNA_6661: 15029 - K11699 RDR, RDRP RNA-dependent RNA polymerase, at 1,375,555 to 1,377,901 15029 mRNA_6662: 15030 - HMMPfam-G-patch domain-PF01585,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-RNA recognition motif-SM00360,SMART-glycine rich nucleic binding domain-SM00443,SUPERFAMILY--SSF54928, at 1,379,343 to 1,382,272 15030 mRNA_6663: 15031 - Hypothetical Protein, at 1,382,729 to 1,383,844 15031 mRNA_6664: 15032 - K03165 TOP3 DNA topoisomerase III, at 1,384,031 to 1,388,134 15032
Locus Name Description Strand Phenotype
mRNA_6654 15022 K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor - cofit
mRNA_6655 15023 Interpro Domain of unknown function (DUF1772) - insig.
mRNA_6656 15024 KOG1674 Cyclin - cofit
mRNA_6657 15025 K16302 CNNM metal transporter CNNM - cofit
mRNA_6658 15026 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-4Fe-4S ferredoxin-type iron-sulfur binding domain profile.-PS51379,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 - cofit
mRNA_6659 15027 K05663 ABC.ATM mitochondrial ABC transporter ATM - no data
mRNA_6660 15028 KOG1342 Histone deacetylase complex, catalytic component RPD3 + cofit
mRNA_6661 15029 K11699 RDR, RDRP RNA-dependent RNA polymerase - insig.
mRNA_6662 15030 HMMPfam-G-patch domain-PF01585,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,ProSiteProfiles-G-patch domain profile.-PS50174,SMART-RNA recognition motif-SM00360,SMART-glycine rich nucleic binding domain-SM00443,SUPERFAMILY--SSF54928 - insig.
mRNA_6663 15031 Hypothetical Protein + cofit
mRNA_6664 15032 K03165 TOP3 DNA topoisomerase III - insig.

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