Gene info for mRNA_6804 in Rhodosporidium toruloides IFO0880

Name: 15172
Annotation: HMMPfam-CFEM domain-PF05730
Type 1: Protein-coding gene
Located on scaffold scaffold_7, + strand, nucleotides 173,731 to 174,873
See nucleotide sequence around mRNA_6804 or for all of scaffold scaffold_7

Other databases: MicrobesOnline, NCBI

Nearby Genes

500 nt 15167 and 15168 are separated by 168 nucleotides15168 and 15169 are separated by 878 nucleotides15169 and 15170 are separated by 286 nucleotides15170 and 15171 are separated by 91 nucleotides15171 and 15172 are separated by 173 nucleotides15172 and 15173 are separated by 118 nucleotides15173 and 15174 are separated by 655 nucleotides15174 and 15175 are separated by 423 nucleotides15175 and 15176 are separated by 586 nucleotides15176 and 15177 are separated by 367 nucleotides mRNA_6799: 15167 - K00033 PGD, gnd, gntZ 6-phosphogluconate dehydrogenase, at 163,328 to 165,722 15167 mRNA_6800: 15168 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 165,891 to 167,581 15168 mRNA_6801: 15169 - K15279 SLC35C1, FUCT1 solute carrier family 35 (GDP-fucose transporter), member C1, at 168,460 to 170,274 15169 mRNA_6802: 15170 - Hypothetical Protein, at 170,561 to 172,312 15170 mRNA_6803: 15171 - KOG3131 Uncharacterized conserved protein, at 172,404 to 173,557 15171 mRNA_6804: 15172 - HMMPfam-CFEM domain-PF05730, at 173,731 to 174,873 15172 mRNA_6805: 15173 - Hypothetical Protein, at 174,992 to 176,183 15173 mRNA_6806: 15174 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 176,839 to 177,908 15174 mRNA_6807: 15175 - HMMPfam-GRIP domain-PF01465,ProSiteProfiles-GRIP domain profile.-PS50913,SMART-golgin-97, RanBP2alpha,Imh1p and p230/golgin-245-SM00755, at 178,332 to 182,273 15175 mRNA_6808: 15176 - K12856 PRPF8, PRP8 pre-mRNA-processing factor 8, at 182,860 to 191,504 15176 mRNA_6809: 15177 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 191,872 to 193,044 15177
Locus Name Description Strand Phenotype
mRNA_6799 15167 K00033 PGD, gnd, gntZ 6-phosphogluconate dehydrogenase - cofit
mRNA_6800 15168 K04709 LAG1 Acyl-CoA-dependent ceramide synthase - strong
mRNA_6801 15169 K15279 SLC35C1, FUCT1 solute carrier family 35 (GDP-fucose transporter), member C1 + strong
mRNA_6802 15170 Hypothetical Protein + cofit
mRNA_6803 15171 KOG3131 Uncharacterized conserved protein - cofit
mRNA_6804 15172 HMMPfam-CFEM domain-PF05730 + cofit
mRNA_6805 15173 Hypothetical Protein - cofit
mRNA_6806 15174 BLAST putative protein [Melanopsichium pennsylvanicum 4] - no data
mRNA_6807 15175 HMMPfam-GRIP domain-PF01465,ProSiteProfiles-GRIP domain profile.-PS50913,SMART-golgin-97, RanBP2alpha,Imh1p and p230/golgin-245-SM00755 + cofit
mRNA_6808 15176 K12856 PRPF8, PRP8 pre-mRNA-processing factor 8 + cofit
mRNA_6809 15177 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383 + cofit

Or browse nearby genes

Or see the comparative fitness browser